Gene
| Gene Model ID | pfu_aug1.0_7936.1_38666 |
|---|---|
| Locus | scaffold7936.1 : 12023 ... 31725 : - |
| To GenomeBrowser | scaffold7936.1:12023..31725 |
| Genes list of scaffold | scaffold7936.1 |
| Synonym | pfu_aug2.0_1255.1_18221 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7936.1_38666.t1 | 5 | 1 | Beta_helix | 3 | 80 | 2.4e-10 | 40.3 | 0.00028 | 4.1 | 7.1 |
| pfu_aug1.0_7936.1_38666.t1 | 5 | 2 | Beta_helix | 212 | 216 | 2.4e-10 | 40.3 | 0.27 | 4000.0 | -2.6 |
| pfu_aug1.0_7936.1_38666.t1 | 5 | 3 | Beta_helix | 446 | 501 | 2.4e-10 | 40.3 | 0.00037 | 5.5 | 6.7 |
| pfu_aug1.0_7936.1_38666.t1 | 5 | 4 | Beta_helix | 543 | 656 | 2.4e-10 | 40.3 | 1.7e-14 | 2.4e-10 | 40.3 |
| pfu_aug1.0_7936.1_38666.t1 | 5 | 5 | Beta_helix | 686 | 739 | 2.4e-10 | 40.3 | 0.008 | 120.0 | 2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7936.1_38666.t1 | gi|291239670|ref|XP_002739745.1| | PREDICTED: F-box only protein 10-like [Saccoglossus kowalevskii] | 7.00005e-41 |
Transcript
| Transcript ID | pfu_aug1.0_7936.1_38666.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7936.1_38666.t1 atggtttacgttcagaatccagggtcatgtcatgtcaaattttgtaccttccgtcatgctaccgtcatttttcaacatct gaattcaagtattattgagaattgcgagttttctcaaactgactctgctgccgttactgtcgaaggaaaccctcgtgatg ataagaattggacgtatggatacatgctggaaaaaatatccaatgtcagcagcctgtgtcgtcttcagcataacaaaggg tatgaaactgcccctgcatcggcttattctacagcccattctacatccactgctcttaccaataaaaaacttctggaatc aaaaacagacttgtcatcggggactgattgtgggtacccaggccaaagtatgggtagcgtggcacacatgtctctcatgc acagtgacgttacagaacaagctgcaattcatagtagtctcgtgcacaacttccgtaaattaaatcttcagaacaattca cactttgaagatgtgaatggccaaatgaagagagagcatagcacagctactacaaaaagttcaacaactttcaaaacaga cagtttcaagagagaaaatagcacagcaacatttaaaagttgttcaacgtttaaaacggattctgacttacagatttcaa acggagcagtttcaaatgacgatggaatggatggaacaacattcagaagaaagcacagcagggatagaaaggaagattat gttgttgacaaagatgactcacaagaaaagtttgaagtaaatcaacttcacaaaaaagtttcagaatcaaacatcagtga cgatagatattccggtaattcgtttgtctcagacactgttgaaccctctgcttcggcatcggaattcaaaccatcatcat cttcatctaaaattgttcagcacgatgaaattgatggtttagctggttcaaaacaaccacaaccggaaaatggttctgtt gaaccctcacaggagcaaaacaatgaagatgttaggtcaaggtcacagtcaaggtcaactcagaggtcttcaaggtcaaa cacacctatttctacagcaagtggtagtgacttctttgatgatgaagaggatagtattgggggatttgattccggttctg ctaattcaagtcatagaggtagtagtagcagcagtagtgaagatgatgtaattttgttgtcggacacagagagtgatttc tcagacgaggaagaatcggtcatcatgttgacgtgcccagaacaccaacaaccacgatctgtatctgctctgagtattgg ggcggatgttcagtctatatgtagccagaatcagtcggaacatatacgaatcgttcacgacagttccatgcagaagattg ccgatgaggttcatggatgcttaatccactgttgtcgaatgacgcagtgtaagggagccttgatggtcagtttacaagcc cacgctatcgtatctcactgcgacattaacagtgtgggttatgggatccgctgtattcaaaacgcaagggatgaattaca tgaggctgacactatggagttagacagaagtgaaatgcacagccaaaaaagtatggaattctggcaatttatcaatgacg aacagccgcatccacgaagaacatgtcatagggccacagtggaatataacagtatatacaataataacggtcgaggtgtg accttgaagtttggtgatgaggtggcgttgttttgtaatgctatccacggtaaccgtggcaacggtatccacatggatca ggatttcagtgtccttgtcaaggacaacagtgtgacctgtaatgctggggacggcatgaacacttcaggtcaaggacagg tgcaaattcagggtaatgggatttttgacaatcgtgatcatggcatattggccagaaatagcgctacaatcacagaaaat gatgtcacgggaaatcaaagatgtgcaattaaactggaaggcaatgtctttacagagatcagccgttataatttgtttcc atataatcatgataatattcaacgaagagttatgggacttgcacttaagtcggttagaaataaccgactacagtccaaga acgataaggctttatcattgtccagtgttcataaaggcactgtatgtgataatgttatgtgtactgctaagacaacggaa tccggcatctatacctcaaaggactcgacctgtagtgtccaggataatgaggtcgttaccatggaaacaaatacaacaaa tacttgtaacagctctgaacctacaagtgcttcaaacatgaacagaggcatctggaatctgaagaacccaccagctagac ctcacattgaagctccgcccacaatccctactctacctgccaatcaagttaccacggtaacaagagtaacagtgccctct gatggcagttgtgatgaagggagcaaactctgtataattctgtga |
|
Protein
| Protein ID | pfu_aug1.0_7936.1_38666.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7936.1_38666.t1 MVYVQNPGSCHVKFCTFRHATVIFQHLNSSIIENCEFSQTDSAAVTVEGNPRDDKNWTYGYMLEKISNVSSLCRLQHNKG YETAPASAYSTAHSTSTALTNKKLLESKTDLSSGTDCGYPGQSMGSVAHMSLMHSDVTEQAAIHSSLVHNFRKLNLQNNS HFEDVNGQMKREHSTATTKSSTTFKTDSFKRENSTATFKSCSTFKTDSDLQISNGAVSNDDGMDGTTFRRKHSRDRKEDY VVDKDDSQEKFEVNQLHKKVSESNISDDRYSGNSFVSDTVEPSASASEFKPSSSSSKIVQHDEIDGLAGSKQPQPENGSV EPSQEQNNEDVRSRSQSRSTQRSSRSNTPISTASGSDFFDDEEDSIGGFDSGSANSSHRGSSSSSSEDDVILLSDTESDF SDEEESVIMLTCPEHQQPRSVSALSIGADVQSICSQNQSEHIRIVHDSSMQKIADEVHGCLIHCCRMTQCKGALMVSLQA HAIVSHCDINSVGYGIRCIQNARDELHEADTMELDRSEMHSQKSMEFWQFINDEQPHPRRTCHRATVEYNSIYNNNGRGV TLKFGDEVALFCNAIHGNRGNGIHMDQDFSVLVKDNSVTCNAGDGMNTSGQGQVQIQGNGIFDNRDHGILARNSATITEN DVTGNQRCAIKLEGNVFTEISRYNLFPYNHDNIQRRVMGLALKSVRNNRLQSKNDKALSLSSVHKGTVCDNVMCTAKTTE SGIYTSKDSTCSVQDNEVVTMETNTTNTCNSSEPTSASNMNRGIWNLKNPPARPHIEAPPTIPTLPANQVTTVTRVTVPS DGSCDEGSKLCIIL |
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