Gene
| Gene Model ID | pfu_aug1.0_7974.1_09673 |
|---|---|
| Locus | scaffold7974.1 : 4009 ... 7535 : - |
| To GenomeBrowser | scaffold7974.1:4009..7535 |
| Genes list of scaffold | scaffold7974.1 |
| Synonym | pfu_aug2.0_23.1_10095 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7974.1_09673.t1 | 1 | 1 | DSBA | 3 | 174 | 1.2e-21 | 77.1 | 1.9e-25 | 1.4e-21 | 76.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7974.1_09673.t1 | gi|291229532|ref|XP_002734720.1| | PREDICTED: uncharacterized protein LOC100375622 [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 2 |
| mantleEdge | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7974.1_09673.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7974.1_09673.t1 atggaaatggccatggactcggtcaaggaaaagtacgatttccgagtccgttgggaaccgtttatgctccgacccaacac cccacccgagggatcgcctaagcctgcacagtatacggaccctaataatccaagagttgcggctttgaaacaaagtggtg ctgacgttggtctggactttacatacaaatgccctgtttttccgaatacgatcaaaccacatgttcttatggaatacgcc aaggatgtggacgacggagagaaacaaaaccaagtggcagaacttttattccataaatatttcacggatggtgacgcttt aggagacacgaccctcctggatgttgcatccgcggctggcctggacaaagatcaacttctaagtcgactaactgaccaat ccaaactagaaggcgctctcaataaggcattaagttggtcaaataaggggatatcaggagttcctacgttttacatgaat ggtcaaaagatgttttccggagcgcaggacaaggataccttcatcagagtgttcgaaatcgtggccgacaaattcccact gcagaccactagcaagtcataa |
|
Protein
| Protein ID | pfu_aug1.0_7974.1_09673.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7974.1_09673.t1 MEMAMDSVKEKYDFRVRWEPFMLRPNTPPEGSPKPAQYTDPNNPRVAALKQSGADVGLDFTYKCPVFPNTIKPHVLMEYA KDVDDGEKQNQVAELLFHKYFTDGDALGDTTLLDVASAAGLDKDQLLSRLTDQSKLEGALNKALSWSNKGISGVPTFYMN GQKMFSGAQDKDTFIRVFEIVADKFPLQTTSKS |
|