Gene
| Gene Model ID | pfu_aug1.0_7982.1_67774 |
|---|---|
| Locus | scaffold7982.1 : 11026 ... 16785 : - |
| To GenomeBrowser | scaffold7982.1:11026..16785 |
| Genes list of scaffold | scaffold7982.1 |
| Synonym | pfu_aug2.0_3510.1_02421 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7982.1_67774.t1 | 2 | 1 | DAG1 | 488 | 601 | 0.0 | 209.2 | 2.4e-20 | 5.1e-17 | 61.9 |
| pfu_aug1.0_7982.1_67774.t1 | 2 | 2 | DAG1 | 618 | 789 | 0.0 | 209.2 | 0.0 | 2.00386e-43 | 148.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7982.1_67774.t1 | gi|241842417|ref|XP_002415407.1| | dystroglycan, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_7982.1_67774.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7982.1_67774.t1 atgaagcatcactatatcgaggtcattgctcaaggtcaaggtcgatcaaaagccaaagatgtgttctccgtcacagtatc tgccgaaacacccagccaccatgtgccttcacccgtaaccaacagtaacggtaaaccacaagtcgtcaaatgcaaagctg aacaaccggaaaccactgttactatagtactggacagcgacatgaaggagatggcggtatctgaccgtttacgtaccatt cagaaattccaagactattttagcttagcctctgacatgttaaaactgttacctctcggatctagacctatgtttgacag ctctgctatggtagctggacctggggataagaagaagccggagacgcctggaatgacgatgtcctggttggtgggatgtg ggaaagtggagggagatcacatgaaaatcttacacaaaatccaagccacatctgaagatggtaccctgcgtgataatgta ggtcacgctgtgattggctggcacgtgacctacacagccaatcacctgaaaccgcgacgaaaaagggcggcaatccgtgc cacggcgactcccgtacaaacacctagcccaccaactgacgtgccgatcaaggttgttactgacactgatatcaaaccaa cggcaacagaacaaatgtcaaggtcagtaccaagtatggaatctcccgcttttacaacatctcagatgataaaaccaact aaaactgttaccatgccgtcagcaagtcccacaccacctgaaccaaccacgcctatgatgacaaggttacctaccctaac gccaaaaccaacaatgaaaccgaaagtaacaacagaagctatccgtccgtcagagggtccagaggaaccggcggtagtag accagacgacaactcaaattttaccaactcgtacctacgttgttaccgatgcacctacatctattgttcctacaacacca aagaaagaagttacagaaaaaccagtaactgatcctgtcacaaagaaaccatctaccgattcgccctctataaattgtcc agacgacaatcaaccgcgacgaccaatagtaaagggaaccacgaaggtaatgttgtttccggtgggtaaagagacaatgt acagcataccaaacgatctgtttatggactgcttcacaccagagggaacaattggattacgtctggttttactcaacggc accggtacattaccaagaaatttctggctctctttgagcaggaggaccgaagaatggaagctgataggattcccactctc gcggcatctgggttccacgagtctcacgcttgctgcagaaaaccaatttgaaataggtccagcatttcacacgattaaag ttggagtggtacccaatcaggcaataagtggtgaaccttcacataaagtaagtctcacgtttgaaggaaatttcaataaa ttcggacctaagaaaatgaaggacctaacaaggaaagttgccagtgtttttagtgacaagaaggatgctagtgatcagat tactgtcttggacgtatctgctggatctatagtatactcgtggactaacaacacacttccgacaaacaggtgcccggcga aagacgtcaccgaaatgatgaaaaggttagttaacgatcaaggaatgctaaaaaagtcagctaaaaggaaactagagccg ttcgttcttcacgaggttgaatcaaatccgctcggtgtttgtgaacaggatcctaacttcccgcttgtaaatacaaaata cctacctactccaactccaaagcctaacgaccccgacacaacaatgaaacccaagccaacgatggagcctcctacaccca aaccaactataaaagtcacagaggcaccaacaacaaaggaagactcggcactaaacgagaaagctgcacagggaacaagt gacgacgagatctggatcaccactgtggtacctgctgtcgtggtggtcgccattttattaattgccctgataatcgcatg tgtattatacaggaaacaaaggaaaggcaagatgtcgttagaggaccaacatacctttgtaaacaagggcgtacctgtga tattacctgacgaatatgacgaaaaacctaatgacgcaacaaaacctcttataatggacgacgaaaaaccgcccatgcct ccaccagagtacacgcgcgcgtcaagtgaaagttcgcggtcgtctcacgaaagacacgaagaacaagaggaagttgaaat ggacgaaacggatgtgacgtcaccgctgtaccgaccgcctcccccagtgcaatcaacaggaagtaacaaacagcctcgtc ctcatattccaccagcgtataagaaccctacaccttatgtgccaccttaa |
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Protein
| Protein ID | pfu_aug1.0_7982.1_67774.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7982.1_67774.t1 MKHHYIEVIAQGQGRSKAKDVFSVTVSAETPSHHVPSPVTNSNGKPQVVKCKAEQPETTVTIVLDSDMKEMAVSDRLRTI QKFQDYFSLASDMLKLLPLGSRPMFDSSAMVAGPGDKKKPETPGMTMSWLVGCGKVEGDHMKILHKIQATSEDGTLRDNV GHAVIGWHVTYTANHLKPRRKRAAIRATATPVQTPSPPTDVPIKVVTDTDIKPTATEQMSRSVPSMESPAFTTSQMIKPT KTVTMPSASPTPPEPTTPMMTRLPTLTPKPTMKPKVTTEAIRPSEGPEEPAVVDQTTTQILPTRTYVVTDAPTSIVPTTP KKEVTEKPVTDPVTKKPSTDSPSINCPDDNQPRRPIVKGTTKVMLFPVGKETMYSIPNDLFMDCFTPEGTIGLRLVLLNG TGTLPRNFWLSLSRRTEEWKLIGFPLSRHLGSTSLTLAAENQFEIGPAFHTIKVGVVPNQAISGEPSHKVSLTFEGNFNK FGPKKMKDLTRKVASVFSDKKDASDQITVLDVSAGSIVYSWTNNTLPTNRCPAKDVTEMMKRLVNDQGMLKKSAKRKLEP FVLHEVESNPLGVCEQDPNFPLVNTKYLPTPTPKPNDPDTTMKPKPTMEPPTPKPTIKVTEAPTTKEDSALNEKAAQGTS DDEIWITTVVPAVVVVAILLIALIIACVLYRKQRKGKMSLEDQHTFVNKGVPVILPDEYDEKPNDATKPLIMDDEKPPMP PPEYTRASSESSRSSHERHEEQEEVEMDETDVTSPLYRPPPPVQSTGSNKQPRPHIPPAYKNPTPYVPP |
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