Gene
| Gene Model ID | pfu_aug1.0_7992.1_09677 |
|---|---|
| Locus | scaffold7992.1 : 10146 ... 18569 : + |
| To GenomeBrowser | scaffold7992.1:10146..18569 |
| Genes list of scaffold | scaffold7992.1 |
| Synonym | pfu_aug2.0_609.1_30973 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | tachykinin receptor-like protein-like |
| Description | XP_002734256.1 PREDICTED: tachykinin receptor-like protein-like [Saccoglossus kowalevskii] 103 103 83% 7e-25 45%7TM_GPCR_Srsx 1 102 8.3e-08 31.6 4.0e-11 9.0e-08 31.5N-terminal truncated |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7992.1_09677.t1 | 1 | 1 | 7TM_GPCR_Srsx | 1 | 91 | 6.1e-07 | 28.8 | 2.7e-10 | 6.8e-07 | 28.7 |
| pfu_aug1.0_7992.1_09677.t1 | 1 | 1 | 7tm_1 | 2 | 111 | 5.0e-19 | 68.4 | 2.3e-22 | 5.7e-19 | 68.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7992.1_09677.t1 | gi|291232133|ref|XP_002735999.1| | 3.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7992.1_09677.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7992.1_09677.t1 atggctatcggaatcgacagatttatggccgtcacgttccctcttcattccaggatcacgtacaggcgcggaaagtatgt gatcgtgatagtgtggatttgctctttatctttagcaagtgtccagttgttcataggagaagctcgagaagacgctccca acaaatatgaatgtaatgaatattggccagacaacaggtcacggcgtatttacaccattttcctgatgctgatgacgtat ctgctacctctggttatattactagtgacatatactattgtcggtatcatactctggagaagaacagccccgggtaacaa acatcacgttagagatcttcatcagcttaaatcaaaaatcaagaacttcctcagtgacgatgttagtcaatcacgtgtcc ctgactgcgaagcttatctgaaagacgcctag |
|
Protein
| Protein ID | pfu_aug1.0_7992.1_09677.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7992.1_09677.t1 MAIGIDRFMAVTFPLHSRITYRRGKYVIVIVWICSLSLASVQLFIGEAREDAPNKYECNEYWPDNRSRRIYTIFLMLMTY LLPLVILLVTYTIVGIILWRRTAPGNKHHVRDLHQLKSKIKNFLSDDVSQSRVPDCEAYLKDA |
|