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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_80101.1_34913
Locus scaffold80101.1 : 1 ... 3424 : -
To GenomeBrowser scaffold80101.1:1..3424
Genes list of scaffold scaffold80101.1
Synonym pfu_aug2.0_3510.1_02420

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_80101.1_34913.t1 1 1 Exo_endo_phos 38 252 2.9e-08 33.9 5.3e-12 3.9e-08 33.5
pfu_aug1.0_80101.1_34913.t1 1 1 Exo_endo_phos_2 145 255 1.4e-13 50.5 3.5e-17 2.6e-13 49.6

Transcript
Transcript IDpfu_aug1.0_80101.1_34913.t1
Definition-
>pfu_aug1.0_80101.1_34913.t1
aagctacgaaatagaaatagccgtaattcaaatcacaaatcaacaaatacaactaaatccaggacagacagcaatcccta
cgatgttccacctaagaaaaaccttcgaattatgacggtaaactgtcggagcgttaaagataaaaaagaggaacttcaaa
cagccatccactacctaaaaccagatatagtatgtggaacagagtcatggctaaaaggagtaaaaccgggacaaaatcca
tctagagacgcaattaaatctagcgaaatattcccaccagaatataacgtatatagaaatgacagaggtacacttggagg
aggtgtctttattcttgttgagaagtcgataacatctatcgaaaaaccagaatttataacagaaggagaaatacagtggg
tgaaaatcaagatgaaaaacaacaaggacctactgattggctcatactatatgccacatagagaacagaaacacctagat
gaacttaagaaatcactagatataatcgacctaaataacgtcacaaacaaaatattaactggagacttcaactgcccaga
cataaattggaacttacaaacagcaaaagggccagaaagggaaatacaacaaggactcgcagacatcatgagtgcaaata
atctcactcaaaatcatgaacatcccacaagagaggataaccttttggacttggtctttgtttccaacccaagcttagta
aaatcgtccataaacgtaccaggcatatcagatcacgacattgtaataacagatatggatacaaaggtgcactacaatag
ag

Protein
Protein IDpfu_aug1.0_80101.1_34913.t1
Definition-
>pfu_aug1.0_80101.1_34913.t1
KLRNRNSRNSNHKSTNTTKSRTDSNPYDVPPKKNLRIMTVNCRSVKDKKEELQTAIHYLKPDIVCGTESWLKGVKPGQNP
SRDAIKSSEIFPPEYNVYRNDRGTLGGGVFILVEKSITSIEKPEFITEGEIQWVKIKMKNNKDLLIGSYYMPHREQKHLD
ELKKSLDIIDLNNVTNKILTGDFNCPDINWNLQTAKGPEREIQQGLADIMSANNLTQNHEHPTREDNLLDLVFVSNPSLV
KSSINVPGISDHDIVITDMDTKVHYNR

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