Gene
| Gene Model ID | pfu_aug1.0_8023.1_38680 |
|---|---|
| Locus | scaffold8023.1 : 14696 ... 33770 : + |
| To GenomeBrowser | scaffold8023.1:14696..33770 |
| Genes list of scaffold | scaffold8023.1 |
| Synonym | pfu_aug2.0_1103.1_11434 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8023.1_38680.t1 | 1 | 1 | UbiA | 186 | 250 | 4.1e-08 | 32.7 | 8.0e-12 | 6.0e-08 | 32.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8023.1_38680.t1 | gi|317419605|emb|CBN81642.1| | Protoheme IX farnesyltransferase, mitochondrial [Dicentrarchus labrax] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8023.1_38680.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8023.1_38680.t1 atgctgcgatttgtggcgaaagcagtagctgaacaaccgtgttttggttgcctgttttctctgcaaaggtcctcatgtct tgtggatactagaaggttttcaaggagaacagctactatagagaaagatgaggaaaatgatgtttctccagataagatta gagacatgagtgacaaaaatcctgcaatttccaaaacttcagaaccaaggacaaaattgaagaaaagaaaagtgctacat ccagaaagcaatgatgataaataccttctattccataagaaatcaaagacattgttagaacttagtaagattcaagacga tcaggattttagtgtttctttcatatttccaaggacttcggagatgatacattttagtgcgagacctcgtgattataatt ccctacagcagacattacaacaagagaagaatgaaacaaatccggccagtcaagtggactctatagaagactccatgtgg gtagaaatgaagactgatatgtccaaactaacagattactatcttaggttgtccaaaataagattaacaggtttggtagt actaacttccatggctggatatgccatggctcctcttccatttgattttctgaccttcacctctgctacctttggaacag ctttgacatcctgttcagcaaatgccgtaaatcagtattttgaggtaccatttgattcccagatgaacagaacgaagaac cgagtaattgttaaaggattgatcagccttactggtcaaaggccagtcgagcttatgcgataccattttgtccggcgtcc gtccgtctgtctgtttgtctgtatggaaccaataatatatgataggatcagttgttggtacagtacctaccatgatggga tgggcagctcatactggtacactggatccaggggcatggctactagcagctatattatatgcttggcagtttccacactt caatgccctcagctggaatctacgtcctga |
|
Protein
| Protein ID | pfu_aug1.0_8023.1_38680.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8023.1_38680.t1 MLRFVAKAVAEQPCFGCLFSLQRSSCLVDTRRFSRRTATIEKDEENDVSPDKIRDMSDKNPAISKTSEPRTKLKKRKVLH PESNDDKYLLFHKKSKTLLELSKIQDDQDFSVSFIFPRTSEMIHFSARPRDYNSLQQTLQQEKNETNPASQVDSIEDSMW VEMKTDMSKLTDYYLRLSKIRLTGLVVLTSMAGYAMAPLPFDFLTFTSATFGTALTSCSANAVNQYFEVPFDSQMNRTKN RVIVKGLISLTGQRPVELMRYHFVRRPSVCLFVCMEPIIYDRISCWYSTYHDGMGSSYWYTGSRGMATSSYIICLAVSTL QCPQLESTS |
|