Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8027.1_45786
Locus scaffold8027.1 : 1714 ... 4895 : -
To GenomeBrowser scaffold8027.1:1714..4895
Genes list of scaffold scaffold8027.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_8027.1_45786.t1 1 1 Lectin_C 43 142 1.3e-10 41.8 1.3e-14 1.9e-10 41.3

Transcript
Transcript IDpfu_aug1.0_8027.1_45786.t1
Definition-
>pfu_aug1.0_8027.1_45786.t1
atgacaactgcagtaacagaacaagcattaacaacgactccagtaccaacaacgaaatatgtccctcctggatttaccac
aggaatgaatggacagcttgtctactttttggatccgaacgaggacagccagcataaagcagtttctacttgtgggcaat
ccggaggtcgattaatacatgtatacaatgacgccaccatggactttgtcagtactctagcaggcggagtcgcaaattgt
gtttatataaatggccggaaggaagcaggtggctggacatacaaagatggatatgagattgaaactttcttctggggaga
tgatcaaccggatcaaacggaaaatgacgatatttgtcttgttgtgtctgattccagtggcatgaacgacgtcttttgtg
atactttatgccaggctatttgtgaatatgtgtaa

Protein
Protein IDpfu_aug1.0_8027.1_45786.t1
Definition-
>pfu_aug1.0_8027.1_45786.t1
MTTAVTEQALTTTPVPTTKYVPPGFTTGMNGQLVYFLDPNEDSQHKAVSTCGQSGGRLIHVYNDATMDFVSTLAGGVANC
VYINGRKEAGGWTYKDGYEIETFFWGDDQPDQTENDDICLVVSDSSGMNDVFCDTLCQAICEYV

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