Gene
| Gene Model ID | pfu_aug1.0_803.1_00504 |
|---|---|
| Locus | scaffold803.1 : 17236 ... 23172 : + |
| To GenomeBrowser | scaffold803.1:17236..23172 |
| Genes list of scaffold | scaffold803.1 |
| Synonym | pfu_aug2.0_4458.1_29302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_803.1_00504.t1 | 2 | 1 | NACHT | 51 | 77 | 2.2e-14 | 53.4 | 1.5e-06 | 0.0045 | 16.6 |
| pfu_aug1.0_803.1_00504.t1 | 2 | 2 | NACHT | 96 | 225 | 2.2e-14 | 53.4 | 5.6e-12 | 1.7e-08 | 34.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_803.1_00504.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_803.1_00504.t1 atggcaataggaaagatttttgctccagtctctatcagagaagacctagaatacaaagagaaaggtcgaaatatcgggat gcaaaataagagtacgaaaccagtaaactgtgtcaaagatatgctctatatcgacgacgatatggctagaaatgtgtttc tgttaggggaggccgggattgggaaaacggtattctgtcttagattggttgataattggtgcaaggcgcataattctgat gaaagtgaatcgaactcggcagattctaatgaccgtttagtatcatgggtatatcctctgaggaattttgatttcctctt ttcaattcagttaagacatgttaacaaatctaggtcttctgtcctcgatatgatcatcaaagatgcctttcacagtcatc gagggagtcatgacgtcatacgtcgagttctcttaagtgagaattaccgatgcctcatagttattgatggcgtcgatgag tggaaaatttcagatgaaattcgatcagaattaagacatgaaggcttacctaatactgaaaacatatcaaattgtacgtt catatggtcaatgcgaccatggacgatggaaaactttagtgaaatgatccggcgtaaggacagggttgtagaaatacaag gccttgatacttacagtatcaatatcgttattgaaaatctattagtgaatttctatgagttagataaaaagtcagtgaaa tatgaacaaaagctaaaagagataaaaaagaaatcagaaaatttagnaaaggctacagtcgatatcctcacacatcacta taaggacatcaaatctctgcgtataataagtatacctagtgatgaaaagaatggtatcactgattcccttcttaaacagt tcctttctaatacaagatcactacaatcattatctattaatggatacaactcaaacaggaccttatatcatataggtagt attttctcctcactatcaaatctattactgtacaacataatattaacacctaacgccctgtgttcattaaaaacagcatt acagtcaaacagagtgatacagacactgggtctgaagagcattcaatgtcagatcagtaaggatcatgctcctacaccag cgttactgtgtggtattatacatatcctacccgacttaccatgtctgtcttcattatctattatgataaataacaaggat gagaaaacagtatttcgtgacatattaagtcgattgagtcatttacattgtatgtattactttagtacacatccccgtga tgatggatatgaccgtgatgtagtgagaactctaagcatgtggtcagggttacgttggttatatctctctagtgttgatt tgggtgactgtggattacaattgtcacataatatgttgcatataaaggaattattattatatacagtacaaatgtcatca tcatcctggagatacttcatacagtctgtacttaatattcagcatacttttaatgtacttctttatgaagtagatattga tgaagttagtaagacaatgataagatcatctccacaattaaagattgatattgataaagtagacgataagaataatctga ggcatgacttgtgttttaaaagaatatggccacagacaaatgtcacagaagtatcccaatga |
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Protein
| Protein ID | pfu_aug1.0_803.1_00504.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_803.1_00504.t1 MAIGKIFAPVSIREDLEYKEKGRNIGMQNKSTKPVNCVKDMLYIDDDMARNVFLLGEAGIGKTVFCLRLVDNWCKAHNSD ESESNSADSNDRLVSWVYPLRNFDFLFSIQLRHVNKSRSSVLDMIIKDAFHSHRGSHDVIRRVLLSENYRCLIVIDGVDE WKISDEIRSELRHEGLPNTENISNCTFIWSMRPWTMENFSEMIRRKDRVVEIQGLDTYSINIVIENLLVNFYELDKKSVK YEQKLKEIKKKSENLXKATVDILTHHYKDIKSLRIISIPSDEKNGITDSLLKQFLSNTRSLQSLSINGYNSNRTLYHIGS IFSSLSNLLLYNIILTPNALCSLKTALQSNRVIQTLGLKSIQCQISKDHAPTPALLCGIIHILPDLPCLSSLSIMINNKD EKTVFRDILSRLSHLHCMYYFSTHPRDDGYDRDVVRTLSMWSGLRWLYLSSVDLGDCGLQLSHNMLHIKELLLYTVQMSS SSWRYFIQSVLNIQHTFNVLLYEVDIDEVSKTMIRSSPQLKIDIDKVDDKNNLRHDLCFKRIWPQTNVTEVSQ |
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