Gene
| Gene Model ID | pfu_aug1.0_8032.1_09686 |
|---|---|
| Locus | scaffold8032.1 : 4686 ... 19578 : + |
| To GenomeBrowser | scaffold8032.1:4686..19578 |
| Genes list of scaffold | scaffold8032.1 |
| Synonym | pfu_aug2.0_1287.1_24841 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | tubulin polymerization promoting protein (TPPP) |
| Description | BLASTP best hit to NCBI Accession XP532620 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8032.1_09686.t1 | 1 | 1 | p25-alpha | 33 | 197 | 2.5e-20 | 73.3 | 1.1e-23 | 3.4e-20 | 72.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8032.1_09686.t1 | gi|73977295|ref|XP_532620.2| | PREDICTED: tubulin polymerization-promoting protein family member 2 isoformX1 [Canis lupus familiaris] | 9.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8032.1_09686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8032.1_09686.t1 atggcaacggcagacattactgatgaagatataaaacaagtatgcgaaaaattaaaagaatgcgttgtggctgcaaaagg gggcggtaaattgacagcagaagagaaaactcagttaaataacaaagcttgtaagaaaatggttactgatacaggtctcc caccaaaatgttcccagggctttgacattgctttcagtgccgtcaagaaatcgaaaccaggaatcgtcaacctttcaaaa catgacgaggttagggatctattggatagatgtgcaaaagaatatgcaacggtacaaaaagggaaagataaaaaaccggt tacagatgatgaaaaaagagagtacaaagtcaaactgtgtgacgctataaagaatgcaacgtttaatgcacaatcaaaag cagaacctacgaacaagaaggccagtgatgctacagcccgtctaacggatacgaaaaagtatactggcgcccacaaagag cggtttgacgcagagggcaaaggaaagggtgccgagggcagaacggacaaagctgacaacagtggatatgtaggaaatta caaaggtgcaggaacatatgacgctaaaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_8032.1_09686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8032.1_09686.t1 MATADITDEDIKQVCEKLKECVVAAKGGGKLTAEEKTQLNNKACKKMVTDTGLPPKCSQGFDIAFSAVKKSKPGIVNLSK HDEVRDLLDRCAKEYATVQKGKDKKPVTDDEKREYKVKLCDAIKNATFNAQSKAEPTNKKASDATARLTDTKKYTGAHKE RFDAEGKGKGAEGRTDKADNSGYVGNYKGAGTYDAKK |
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