Gene
| Gene Model ID | pfu_aug1.0_8050.1_24326 |
|---|---|
| Locus | scaffold8050.1 : 1 ... 27774 : + |
| To GenomeBrowser | scaffold8050.1:1..27774 |
| Genes list of scaffold | scaffold8050.1 |
| Synonym | pfu_aug2.0_121.1_03657 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8050.1_24326.t1 | 3 | 1 | Dishevelled | 52 | 117 | 4.6e-11 | 42.7 | 1.2e-14 | 4.6e-11 | 42.7 |
| pfu_aug1.0_8050.1_24326.t1 | 3 | 2 | Dishevelled | 125 | 147 | 4.6e-11 | 42.7 | 0.39 | 1400.0 | -0.5 |
| pfu_aug1.0_8050.1_24326.t1 | 1 | 1 | PDZ | 155 | 238 | 1.4e-22 | 79.5 | 6.6e-26 | 2.4e-22 | 78.8 |
| pfu_aug1.0_8050.1_24326.t1 | 3 | 3 | Dishevelled | 280 | 309 | 4.6e-11 | 42.7 | 0.087 | 320.0 | 1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8050.1_24326.t1 | gi|326392961|gb|ADZ58512.1| | Dvl-2 [Schmidtea mediterranea] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8050.1_24326.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8050.1_24326.t1 tattacatatatttctctgacttatttcagtgccaatgcgtctgtagtgagtagagatcagagctgtgatacgtgtacag agacagactcagtacttagttctcgcagagatggccatagaggtatgcgacaaagctatagtaactatggttacgtaaga aatcatcgccttaacaatgattcgaatgctccacgaattaatggtcatagtaaacatgagcgacacagagtacataatta cggggattcatccaccatgctcagcagtgacctggaaactaccagcttctttgactctgaggacgatagccggttctcta ccgttaccgacaccacaaaccgcacatcatcacggtatggacgtcatcggcgacggcgacggaaacacaaaatgcctcct attagcagggcttcgtcattcagtagtataacagattcaacaatgtctcttaacatcatcacagtcacactaaatatgga cacagtcaattttctaggcatcagtattgtaggtcagagtaacaaaggaggagacgggggaatttatgtcggctctatca tgaaaggtggagcagtagcccaggacggtagaatagagccaggtgatatgattttggaagttaacggtgtcagcttcgaa aatatgagtaacgatgacgccgtgcgggcgttaagggaagctgtacaaaaacctggtccaattacactagtcgttgccaa gtgctgggaccctaacccaaccaaaggttatttcaccgttccccgacaggaacctgtacgaccaatcgacccctcagcct gggtagcacataccaccgctctacagcagaactttatgaaccgtgtcgggggacctgctccgtctataagcaatatgacg tctacaagttcttctcttaccagctctataccagaatctgaaatcgtccaaaaagactgcacttgtatattaagtacata caatcacctccgtaaactatggacagataaagacaagcagctatataatcaacaagggcccaatgtaaatagcacaggaa cagatacatttcacaatgcctgttgtgtgccgatgaatcttcctccctctgcaaagaaacttttgtccaataccatttgt gttggcacagagccaaacaataatgtacggggtaaaaaatcaaacacggaaaaggacaaaaacactaaaaaggacaacac tgactctaataagaaagactccgctgaaactcctaaaaagtcagacagtcccgaaaatacagctaaggagaaacctaaaa aaactgtcactattaaagatgagagaccaactgttgttgctagggatagtgtcacctccatagaaacagttgctaagcaa ccagagaatgatcccaccattggtgacaaagaatttggtgatagtattattatatag |
|
Protein
| Protein ID | pfu_aug1.0_8050.1_24326.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8050.1_24326.t1 ITYISLTYFSANASVVSRDQSCDTCTETDSVLSSRRDGHRGMRQSYSNYGYVRNHRLNNDSNAPRINGHSKHERHRVHNY GDSSTMLSSDLETTSFFDSEDDSRFSTVTDTTNRTSSRYGRHRRRRRKHKMPPISRASSFSSITDSTMSLNIITVTLNMD TVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVAQDGRIEPGDMILEVNGVSFENMSNDDAVRALREAVQKPGPITLVVAK CWDPNPTKGYFTVPRQEPVRPIDPSAWVAHTTALQQNFMNRVGGPAPSISNMTSTSSSLTSSIPESEIVQKDCTCILSTY NHLRKLWTDKDKQLYNQQGPNVNSTGTDTFHNACCVPMNLPPSAKKLLSNTICVGTEPNNNVRGKKSNTEKDKNTKKDNT DSNKKDSAETPKKSDSPENTAKEKPKKTVTIKDERPTVVARDSVTSIETVAKQPENDPTIGDKEFGDSIII |
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