Gene
| Gene Model ID | pfu_aug1.0_8050.1_24328 |
|---|---|
| Locus | scaffold8050.1 : 37186 ... 39967 : + |
| To GenomeBrowser | scaffold8050.1:37186..39967 |
| Genes list of scaffold | scaffold8050.1 |
| Synonym | pfu_aug2.0_121.1_03658 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8050.1_24328.t1 | 1 | 1 | ING | 3 | 63 | 1.6e-15 | 57.2 | 4.3e-19 | 1.6e-15 | 57.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8050.1_24328.t1 | gi|260786926|ref|XP_002588507.1| | hypothetical protein BRAFLDRAFT_114530 [Branchiostoma floridae] | 1.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8050.1_24328.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8050.1_24328.t1 atggcagaggaatatctgtcatcagtacgaagcctctctccagaaaaacgaactcaaaaactcgactccattcaaacaat gttctccaagagtaaagaattcggtgatgataaagtccagttagcaatgcaaacttatgaaatggtagacaagcatatac gaaagttagatgcagacttagcgagatttgaggcagacttgaaggagaaaagttcagctatacatcagaagtcagactcc gactcgggcaagaaaagtgagaaatattaa |
|
Protein
| Protein ID | pfu_aug1.0_8050.1_24328.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8050.1_24328.t1 MAEEYLSSVRSLSPEKRTQKLDSIQTMFSKSKEFGDDKVQLAMQTYEMVDKHIRKLDADLARFEADLKEKSSAIHQKSDS DSGKKSEKY |
|