Gene
| Gene Model ID | pfu_aug1.0_80581.1_63850 |
|---|---|
| Locus | scaffold80581.1 : 674 ... 3039 : + |
| To GenomeBrowser | scaffold80581.1:674..3039 |
| Genes list of scaffold | scaffold80581.1 |
| Synonym | pfu_aug2.0_19.1_30004 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_80581.1_63850.t1 | 2 | 1 | KTI12 | 31 | 45 | 9.3e-10 | 38.1 | 0.51 | 2500.0 | -2.7 |
| pfu_aug1.0_80581.1_63850.t1 | 2 | 2 | KTI12 | 142 | 270 | 9.3e-10 | 38.1 | 1.9e-13 | 9.3e-10 | 38.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_80581.1_63850.t1 | gi|327267722|ref|XP_003218648.1| | PREDICTED: L-seryl-tRNA(Sec) kinase [Anolis carolinensis] | 6.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_80581.1_63850.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_80581.1_63850.t1 atgaaatggaaagcacaaagagaagttatcataaattgtgtagacgatcttctttgttactttttgaagaacagacaaca gggggaatctgaaatttcgtcccaagaaaagacagtgcggtctgattctcagagcaataagagtgatgtagaatccgata tagaaagaattggtgaatttaagagctcagatgagaatcttgacagtgaattcacaagtgtattatcactaggtgaggga aatgaggtggaagtccaagattttgacggaagagttcagtgtgaaggtaaccgtatcaatcagcaacaactagaaaacag ttcacaagctgtggcatctctgcttaatgaaaaaagaagtataaagaaaaatgaaaatgagacagacgatgatttgaaag attgcatggataaagattatgtgacgataaaatcagaagatgatgaggaaataagaaaaatgaggaatgagttcagttgt aagataacaagtaatatgaagagaaagttggcagaaaacaagttttcaaaccttgtggtcgctattgatgataacatgta ctacagtagtatgagatataagtattatcaactggctaggaaatatacctgtggattctgtcaagtatgttttgatattg atgtaaatacaactttgtcaagaaatgagtgcagaaaggtcagaaagattacagatgatgtgattgttaccatggcgatg aagctggagattcctgacccaaagaagaattcatgggaagagcattccttgataataaatgctgaaaaaattatggtttc tgataatataaggtatctgacatcaactgattgtgaagtcatcaaattttatggaaacaagtgtaaagttcgggaaaatt aa |
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Protein
| Protein ID | pfu_aug1.0_80581.1_63850.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_80581.1_63850.t1 MKWKAQREVIINCVDDLLCYFLKNRQQGESEISSQEKTVRSDSQSNKSDVESDIERIGEFKSSDENLDSEFTSVLSLGEG NEVEVQDFDGRVQCEGNRINQQQLENSSQAVASLLNEKRSIKKNENETDDDLKDCMDKDYVTIKSEDDEEIRKMRNEFSC KITSNMKRKLAENKFSNLVVAIDDNMYYSSMRYKYYQLARKYTCGFCQVCFDIDVNTTLSRNECRKVRKITDDVIVTMAM KLEIPDPKKNSWEEHSLIINAEKIMVSDNIRYLTSTDCEVIKFYGNKCKVREN |
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