Gene
| Gene Model ID | pfu_aug1.0_8067.1_60363 |
|---|---|
| Locus | scaffold8067.1 : 350 ... 5295 : - |
| To GenomeBrowser | scaffold8067.1:350..5295 |
| Genes list of scaffold | scaffold8067.1 |
| Synonym | pfu_aug2.0_1085.1_18080 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | tyrosinase-like protein 6 |
| Description | NCBI BLASTP best hit to AAZ66340 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8067.1_60363.t1 | 1 | 1 | Tyrosinase | 168 | 257 | 1.2e-07 | 32.1 | 3.3e-11 | 2.5e-07 | 31.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8067.1_60363.t1 | gi|72132971|gb|AAZ66340.1| | tyrosinase [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8067.1_60363.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8067.1_60363.t1 atgcattcgctaacagcgtgttttgtcacctgcctgatcctttcatctgtcggagcgtttctggacattggagaaaatgt ggaagataattttattcaaagttgcctcggtctttacccatacgacaacaatacaacccagcacacgagagactgtgata aatcgttagaaaatttcttcaacttcacttcgtctcaagtgaacacatttttctctctgcaaagggaaagtcaaggcgac ttgttctcggaaaataagagactgaagagacgtgtgggtttgaggataagaagagaatgtagaactttgtccgagcacga gagaaataggctttttgatgccatagtcattttgaagattggacctgagacagctgattttactcagaaaatgtacaaag aagaacacgcaatcttttgtctgttatttgggaatgggtatggtatggttataaatggtccatttagaaactggagactg gataagccatttaactatcgactaagacgaaatatcggtcaacgtgggtctctgataagggcacgtactgtagacaaaat tgtgtatgatccaagaataaggcaccagacacaaataacggctggaaagaattcggtcggatttcccgatccagataatg ggcgtaagcaaagtctagaggaaattcatttcaatattcacgtgtttcttggagagtttgtaaacagtatcgaggatcca atagaatggtttttccatggttacgttgactacatatgggaattgtttagagtaaaacaaaagaaactaggtattgatcc agccaacgactacccagaaaatggtgacgatgagcacagggcgggaaagcgaatggttccattctttcaattcagaaaca tagacggctatagcaacatgttcactgacaggatatacagatatgctccccacccaacctgtggtaacagatgtggcgga gcatcaaaggaattcttgtattgtccaaaaggaggtcatcgccggactcgatgcctatccaggtcaacaaacagagatca tgtaccaccattagtactgaaagagatcagcaatcctatattagaagttcacgtaaggaaaggtatagtaagccgtgccg tgctcaactccatggctcatgaggtagcacttaaggaaggtcccatcaggtaccccaaaatctacccaatcagctatgat gaccctcgtacatttatcggatag |
|
Protein
| Protein ID | pfu_aug1.0_8067.1_60363.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8067.1_60363.t1 MHSLTACFVTCLILSSVGAFLDIGENVEDNFIQSCLGLYPYDNNTTQHTRDCDKSLENFFNFTSSQVNTFFSLQRESQGD LFSENKRLKRRVGLRIRRECRTLSEHERNRLFDAIVILKIGPETADFTQKMYKEEHAIFCLLFGNGYGMVINGPFRNWRL DKPFNYRLRRNIGQRGSLIRARTVDKIVYDPRIRHQTQITAGKNSVGFPDPDNGRKQSLEEIHFNIHVFLGEFVNSIEDP IEWFFHGYVDYIWELFRVKQKKLGIDPANDYPENGDDEHRAGKRMVPFFQFRNIDGYSNMFTDRIYRYAPHPTCGNRCGG ASKEFLYCPKGGHRRTRCLSRSTNRDHVPPLVLKEISNPILEVHVRKGIVSRAVLNSMAHEVALKEGPIRYPKIYPISYD DPRTFIG |
|