Gene
Gene Model ID | pfu_aug1.0_8067.1_60364 |
---|---|
Locus | scaffold8067.1 : 9686 ... 17348 : + |
To GenomeBrowser | scaffold8067.1:9686..17348 |
Genes list of scaffold | scaffold8067.1 |
Synonym | pfu_aug2.0_5019.1_32735 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8067.1_60364.t1 | 2 | 1 | zf-B_box | 17 | 60 | 8.0e-06 | 25.6 | 1.6e-09 | 8.0e-06 | 25.6 |
pfu_aug1.0_8067.1_60364.t1 | 2 | 2 | zf-B_box | 426 | 437 | 8.0e-06 | 25.6 | 0.41 | 2000.0 | -1.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_8067.1_60364.t1 |
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Definition | - |
>pfu_aug1.0_8067.1_60364.t1 atggcgtttgcctcgtctacgatagacgcacaacaggctatcataaaaccgtgtgatctatgtgaagatcatgaaaacgt gaaatggttttgcaaagactgccatcaaaatctctgtgacaagtgtaaacggacacatcttcgcagtacagtttctaaat cccatgacttgatttctattgccgagggacataccattggaaagcgaaaagaatctgaaacatacttgaaggagcaatgc gcaaatattgacgaccgagtgaaagtcatacaatgtaaagctgacgaggaaggagaactgctcaaagcgtccctctcttc ggcaatggaggagcaaaacaaggaaatcaaagatggtaaaaccaaacttcaggacaatatcagggtctatgacgaggaaa tccaaaacgtgaggcaagagcttcgactccagttaacatcgtcattaaatggctttgcgaaggaaaccgcttccaaatta aaggcactacgatcaatttccatttctactcctagcatgagccgattatttgtcgaaggaacgttggacaaaactcacat ccgggaaatgataggaaacatgggaacgccgacaaaaggagcagggatagagggcatcacagaaaaagaggttattcaac gaccgtgcagagtgttatccgcacagaactttgtcaaagcagtaaagctgaataggcttgaatactgtgctagcatatgt ctcagcaaagatggaagcatctggattggcggccttggttttgtttacaaagtcagcgctgacttgtccacagtccatca cgggatatcaaacctgtttgtttcgtcatgtcgttacattgcttgtctgcaatctggagatgctgttgtatcgtatggag aatcgatggtagataagttcacgtccgatggtagaagggtcgaatttacggaccttactccgagaatgggaaccgacata gacgtgacaaaccatgacctggttgcaattaatgttgaccgtgaatccttagtcatattttctaacgaaggacaacgact caaagaaataaaggccctgtcacactataaaacgtttgacaccagcgtgtgccagcgtgtaaggtcgctggctaacacgc tgaatgattgtcatacacactccggtgacgttttgaggacgttgggagaacgctctcacacggagctatacgctattgac tttgcctgcacaaaattggcggcgtgtgtcgaacgtgttggttacacgctccgcgatcgttactcaaacgcaatacagtc gttatgcatacgctgtcatacgttgcacgaacgttactcactcgttaatacacgttacgaacacgctcgtaaaataagct tgacgatagtctaccgttcgcgcaacgtgtttgtaacgtgtacggagcgtttctctgacgactgcctggcgttcacggcg tga |
Protein
Protein ID | pfu_aug1.0_8067.1_60364.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8067.1_60364.t1 MAFASSTIDAQQAIIKPCDLCEDHENVKWFCKDCHQNLCDKCKRTHLRSTVSKSHDLISIAEGHTIGKRKESETYLKEQC ANIDDRVKVIQCKADEEGELLKASLSSAMEEQNKEIKDGKTKLQDNIRVYDEEIQNVRQELRLQLTSSLNGFAKETASKL KALRSISISTPSMSRLFVEGTLDKTHIREMIGNMGTPTKGAGIEGITEKEVIQRPCRVLSAQNFVKAVKLNRLEYCASIC LSKDGSIWIGGLGFVYKVSADLSTVHHGISNLFVSSCRYIACLQSGDAVVSYGESMVDKFTSDGRRVEFTDLTPRMGTDI DVTNHDLVAINVDRESLVIFSNEGQRLKEIKALSHYKTFDTSVCQRVRSLANTLNDCHTHSGDVLRTLGERSHTELYAID FACTKLAACVERVGYTLRDRYSNAIQSLCIRCHTLHERYSLVNTRYEHARKISLTIVYRSRNVFVTCTERFSDDCLAFTA |