Gene
| Gene Model ID | pfu_aug1.0_8067.1_60365 |
|---|---|
| Locus | scaffold8067.1 : 17736 ... 26021 : + |
| To GenomeBrowser | scaffold8067.1:17736..26021 |
| Genes list of scaffold | scaffold8067.1 |
| Synonym | pfu_aug2.0_4899.1_32724 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8067.1_60365.t1 | 3 | 1 | zf-C2H2 | 29 | 52 | 7.5e-07 | 29.1 | 1.9e-06 | 0.0046 | 17.2 |
| pfu_aug1.0_8067.1_60365.t1 | 3 | 2 | zf-C2H2 | 58 | 79 | 7.5e-07 | 29.1 | 1.0e-06 | 0.0025 | 18.0 |
| pfu_aug1.0_8067.1_60365.t1 | 3 | 3 | zf-C2H2 | 369 | 386 | 7.5e-07 | 29.1 | 8.2e-05 | 0.2 | 12.0 |
Transcript
| Transcript ID | pfu_aug1.0_8067.1_60365.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8067.1_60365.t1 atgagtaaccgattttacaactatgtttacacacatcaaatgaatgaaatagctccatgtttctttcagatgacacctgc taaatttgaatgtacactttgcaataaatcctatacacatcgatctgcactacaccgtcataatcgaacggtccatggta gagaatccgtcaaatgtgaattttgtggacaaaagttcagtcgaaaagataattatcttcgacatgtaaagttccatcat gtcagtagacacgacggtgaagataaccgaaacacacagcaaggtggtggtaaacccgatggtgcagacaaatcagaccc caaagtcaacgaacccatcgatgacgaacaaagatgtttttctgaggaagaggcaattaaggggaatctcaacaaaattt ccatgaaggcagaagatcagacaaaatatgatcctttgaccttccttaattcaaaagaggaagctatcagatcactattg aaaaaatccttattgaagcggcgagggatgaaggtgtatactaccatgcaagtgcgattctccaaacagagaggggacca agtggagacgaccgagcccttttttcatggacggtgccatatcatctttaaaatggaagatatcgatatgacaaagtact gcagattgatatcaaccaactacagaccaatcaaggggtcaagctttagaccccttccggccaaattagcagcaaagaaa gccattgtcaatgtgcagaataccgacgatagatgtttcatgtggtccgttctagctgctcttcatcccatccaaggcat caatattcatccgaacagagtcataaacaatgtcgaacatatagacaaactcgacttcacagagattagcttcccggtca aaatctcggacattcccaaattcgaaaagcggaacgccatttccgtcaatgtctttggttatgaaaaaggagatatatat cccctccatctgaccaatgaaaggggactccaacatgtcaatctattgctgatatcagataaagagaaacaacactattg ttggatcaaaaacttcaatcgtcttctaagtgatcagaattctcacaaaaatcagtatcgttactgtcattattgcttac acggattcactaagaagtctctcctgaaaaggcacattccctactgtaaagtgcatggagctcaacggacagaaatgcca cgggaagaagataaatggttgcgattcaccgatgtctcgaaacaactgaaagtcccctttgtcgtgtatgcagactttga gtgcattttagagaagatatatggttgccaaccaaatccatcaaaatcctcaaccattaaactagcaaagcataaaccat ccggatttacttataaagttgtcggtcttaacgaagatctcaccgaggatcacgtggcctatagaggtccagatgcggca gacgattttatagatcatatggtcgagttagaagagcgcctaatccatgtcctccgaaattctaaacccatggagttgac agacgacgactttgaatctttccaaaaagcaactcactgcagcatttgcggaggagaactgggcctcgacgtggcacgtg atcattgtcatctcactggcaaattcagaggggccgcccacatgtcgtgtaatctaaattataaattaagagagcgaatc ccggtattttttcacaatcttcggggatatgatgcccatctcattatggtatccattggtaaagtcaaaaaccgacggct gaactgtattccacagaaccatgaaaaatacatctccttctccccgggaagaatagagtttatcgacaccttccagtttc tatccactagtcttcaggaattggtagaaaatctatcggaagaagatgcatccaaattcagccatctagaaagctacata caaaaaagccatccgggaaatgcaaagatcaaaatggaattattgagtcggaaaggagtgtatccttaccgctacatgaa caccttgagtagatttagcgaaacaaatctacctcccaaagaagccttcttcagcgaccttactgaaagtcatatatcgg aagaggattacttccatgctcaattagtatgggatgttctcaacatcaagaaccttggggagtatcacgatctctacatg gagacggatgttcacctcctggcagaattctttgagaacttcagaactctgtgtttgaacaaatatgaattagaccccgc ccacttttacaagtcacccggtttggcgtggcaggcagccctcaagatgacaggtgttgaactggaattgttcacagatc ctgacatgcacttgtttatcgaaaaagtgttttag |
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Protein
| Protein ID | pfu_aug1.0_8067.1_60365.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8067.1_60365.t1 MSNRFYNYVYTHQMNEIAPCFFQMTPAKFECTLCNKSYTHRSALHRHNRTVHGRESVKCEFCGQKFSRKDNYLRHVKFHH VSRHDGEDNRNTQQGGGKPDGADKSDPKVNEPIDDEQRCFSEEEAIKGNLNKISMKAEDQTKYDPLTFLNSKEEAIRSLL KKSLLKRRGMKVYTTMQVRFSKQRGDQVETTEPFFHGRCHIIFKMEDIDMTKYCRLISTNYRPIKGSSFRPLPAKLAAKK AIVNVQNTDDRCFMWSVLAALHPIQGINIHPNRVINNVEHIDKLDFTEISFPVKISDIPKFEKRNAISVNVFGYEKGDIY PLHLTNERGLQHVNLLLISDKEKQHYCWIKNFNRLLSDQNSHKNQYRYCHYCLHGFTKKSLLKRHIPYCKVHGAQRTEMP REEDKWLRFTDVSKQLKVPFVVYADFECILEKIYGCQPNPSKSSTIKLAKHKPSGFTYKVVGLNEDLTEDHVAYRGPDAA DDFIDHMVELEERLIHVLRNSKPMELTDDDFESFQKATHCSICGGELGLDVARDHCHLTGKFRGAAHMSCNLNYKLRERI PVFFHNLRGYDAHLIMVSIGKVKNRRLNCIPQNHEKYISFSPGRIEFIDTFQFLSTSLQELVENLSEEDASKFSHLESYI QKSHPGNAKIKMELLSRKGVYPYRYMNTLSRFSETNLPPKEAFFSDLTESHISEEDYFHAQLVWDVLNIKNLGEYHDLYM ETDVHLLAEFFENFRTLCLNKYELDPAHFYKSPGLAWQAALKMTGVELELFTDPDMHLFIEKVF |
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