Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8068.1_67792
Locus scaffold8068.1 : 21748 ... 31135 : -
To GenomeBrowser scaffold8068.1:21748..31135
Genes list of scaffold scaffold8068.1
Synonym pfu_aug2.0_453.1_10792

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_8068.1_67792.t1 1 1 GDI 1 67 3.9e-22 78.1 2.8e-26 4.2e-22 78.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_8068.1_67792.t1 gi|241273677|ref|XP_002406620.1| GDI-1 GDP dissociation inhibitor, putative [Ixodes scapularis] 1.0e-20

Transcript
Transcript IDpfu_aug1.0_8068.1_67792.t1
Definition-
>pfu_aug1.0_8068.1_67792.t1
atgggcttatttgagaaaagacggtttaagaattttcttcagtttgcacaagaatttgacatagatgacccaaaaaccta
taaaggcgtagatgcaaaaacaacgacagcagctgacgtatataaaaaatttgggctcgatgggaatacacaggacttta
caggacatgctatctctctttaccgtgatgatgagtatgtacatgtatga

Protein
Protein IDpfu_aug1.0_8068.1_67792.t1
Definition-
>pfu_aug1.0_8068.1_67792.t1
MGLFEKRRFKNFLQFAQEFDIDDPKTYKGVDAKTTTAADVYKKFGLDGNTQDFTGHAISLYRDDEYVHV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495