Gene
| Gene Model ID | pfu_aug1.0_8072.1_09691 |
|---|---|
| Locus | scaffold8072.1 : 566 ... 34116 : + |
| To GenomeBrowser | scaffold8072.1:566..34116 |
| Genes list of scaffold | scaffold8072.1 |
| Synonym | pfu_aug2.0_400.1_00696 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8072.1_09691.t1 | 5 | 1 | Ecm29 | 10 | 135 | 0.0 | 284.7 | 0.0 | 0.0 | 162.0 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 1 | HEAT_2 | 38 | 84 | 2.2e-09 | 37.4 | 0.0076 | 14.0 | 6.0 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 1 | HEAT | 40 | 59 | 4.5e-11 | 41.8 | 0.19 | 340.0 | 1.7 |
| pfu_aug1.0_8072.1_09691.t1 | 5 | 2 | Ecm29 | 149 | 249 | 0.0 | 284.7 | 5.3e-22 | 9.8e-19 | 67.2 |
| pfu_aug1.0_8072.1_09691.t1 | 5 | 3 | Ecm29 | 256 | 328 | 0.0 | 284.7 | 4.6e-18 | 8.5e-15 | 54.2 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 2 | HEAT_2 | 256 | 308 | 2.2e-09 | 37.4 | 0.84 | 1600.0 | -0.6 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 3 | HEAT_2 | 602 | 721 | 2.2e-09 | 37.4 | 1.7e-06 | 0.0032 | 17.7 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 2 | HEAT | 604 | 631 | 4.5e-11 | 41.8 | 3.1e-05 | 0.057 | 13.5 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 3 | HEAT | 659 | 688 | 4.5e-11 | 41.8 | 9.1e-06 | 0.017 | 15.1 |
| pfu_aug1.0_8072.1_09691.t1 | 5 | 4 | Ecm29 | 673 | 744 | 0.0 | 284.7 | 0.0079 | 15.0 | 3.9 |
| pfu_aug1.0_8072.1_09691.t1 | 5 | 5 | Ecm29 | 786 | 835 | 0.0 | 284.7 | 0.19 | 350.0 | -0.6 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 4 | HEAT_2 | 790 | 834 | 2.2e-09 | 37.4 | 0.0037 | 6.9 | 7.0 |
| pfu_aug1.0_8072.1_09691.t1 | 4 | 4 | HEAT | 792 | 820 | 4.5e-11 | 41.8 | 0.06 | 110.0 | 3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8072.1_09691.t1 | gi|119579476|gb|EAW59072.1| | hCG28762 [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8072.1_09691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8072.1_09691.t1 atgacaaattcggacgagcttgctttagtggagagagttttcttaaggataggatcagctgagacggatgatcagttaga gacatctctctccaagttcctgacacctgtacttataaagttaaacagtaaggatgaagctgtcagaaagaaggtcatgg aactccttgttcatatcaataagcgtcttaaaagccgtcccaaagttttactgcccgtggaatctcttatacaacagtac agggatcctgaagctacttctattattacgaatttttccatcatctacatacggatgggatatcctcgtttggatggagt gaaacaagcagagttactgcccttgatgttatcatgtctagagggaaaacctaaagcccaacaagacagtgccaaggcca ttatgagtcagtcccagcgaccgtccactgcccctgtaggtggggcttcacctgccacggccacttttgtccctccacca gccatgaatgagtacgccttccgtcgagtgacgggtgataatcccctggcccctgaggatctggagaaagctaaaatcgg cattataaagttcctaggtgctgatttgtttacagaggaggaggttgtctgtcactatgttatagctgctgcagatactc ggcatggagttgctacagctgctgattttgaggtgaagaaaattcaggggagtgtagattggaactgtatatcaataatc aacagactgtatagcttgtttcaaggcacaattgatgtgaaagggcaggaagactcagaaaccaagctagccatacagga gtcactgtcccttatgtcagacgcatttaaaaacatcgactcagctaaccaaaaactcatggaggcactcttaatgcaga acattgaaaaggatcagccgcaggccaggatgatgtctgtacaatatgctaggacggtgttcccctctgaccatgtacca tcgagatatatactactccttgcttgtggtgatatgaaggaagacattaaagtagaagccaccaaatcattgcgaggcat tatgagtaagagtaaggtcaacatgaaggtaccatcccagtctgagacttgccctacgttacctaacttcacagacatga tggagtatattcacaaacagagtacccagagaatgtcgtcccagaagaggtatgtgataggtaaccatactctgccattt gtacctgcagcatatgaagagatgatactatacctgaggatgtgccttgcggcagggagcggtataacaccagacatgga atcactgtcagccatgcaggaccaagcaccgctggtggccaggcacgtcaaacatatactgtctgagaacagcaccgact cagcaccaattattctctaccttgaattcatcaagaagtttctgtcagctgtgggcggtgcccctgccatgtactgttta ctagagcttgtagcagtggcccctgacaaactggctccacagttcttgtctcagatagactggatcacaagttacatcaa ctctagtaaggaggacctgaaggattacgctagtcagctttatgctatagtcatctgtagtcagcctgaccaagccaaag tcatggagtctgtggaaactctggtcaaaaactatgtggaaaagcccaaacaaatagagctccatctaacgacagcagag gctctggtttacgctgctcaggggacgacgtcaccggccggccgtgacatgtggactgagacagaggacgatttcaagaa aagagtatcacaagaaggtgacacaaagattgagtggtaccttgaacaactgttaaagaaatacataagaagtcctaatc ctcacctacgacaggcagcagtgatctggttgttagctttagtgaagaagtgtggttaccatagtgctttacagggacag ctcagtcagatacaggcggcattcatgagcatgttatcagaaaacgatggtaaactgatgagtgccttcttgtcgggttt aggcgacaggaattcttctgtgaggaaatcttactcctcagctttaggacagcttgttaaggtggcaaaggacagcagtg tggagaagctcataataaaactaagatcttggtatttagagaaagaagaggagtcagcgagacacgcctgtggccaaaca ttacatgccatgagtacccacagtcctgatatattgaaacgtcacgctacactcgcaatgccgctggcattctttgctat gcatgaaaagaagtcagaggctgaagaaaacaagaagaaacattctgatgataatttgtccatatgggaggaggtgtggc ttgaggtaactccaggtacggaggcaggattgaggttatatatacaggagattgtccagttactgggggagactatcgag tctcagtcatggaataccaaagcccaggctgcctcggccatgagtaccgtagcctccaaactacagtcaaaccttggtca ccctcatctcggtaaactactgacggctttgttaacggggcttcagggaaggacctggacaggaaaggaagccttgctac aagccatagacacagtgtgtacattctgcaagggtgctatcacagacggaaatgaaggtcagccaacgttaactcagata actgaggcagttatgaaggaatgtagaaaagataacgtaacctacaagctagaagcgtgtcgatgtatggggaacatact agaactttactctgtggacagattctcagatatgtggaatatattctctccagtattacttaaggatgataaaaaagatg atgatgaagatgaaataaagcctaacatgacgcaatccagattagaatgttactatgaagtcctggaagagctgtag |
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Protein
| Protein ID | pfu_aug1.0_8072.1_09691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8072.1_09691.t1 MTNSDELALVERVFLRIGSAETDDQLETSLSKFLTPVLIKLNSKDEAVRKKVMELLVHINKRLKSRPKVLLPVESLIQQY RDPEATSIITNFSIIYIRMGYPRLDGVKQAELLPLMLSCLEGKPKAQQDSAKAIMSQSQRPSTAPVGGASPATATFVPPP AMNEYAFRRVTGDNPLAPEDLEKAKIGIIKFLGADLFTEEEVVCHYVIAAADTRHGVATAADFEVKKIQGSVDWNCISII NRLYSLFQGTIDVKGQEDSETKLAIQESLSLMSDAFKNIDSANQKLMEALLMQNIEKDQPQARMMSVQYARTVFPSDHVP SRYILLLACGDMKEDIKVEATKSLRGIMSKSKVNMKVPSQSETCPTLPNFTDMMEYIHKQSTQRMSSQKRYVIGNHTLPF VPAAYEEMILYLRMCLAAGSGITPDMESLSAMQDQAPLVARHVKHILSENSTDSAPIILYLEFIKKFLSAVGGAPAMYCL LELVAVAPDKLAPQFLSQIDWITSYINSSKEDLKDYASQLYAIVICSQPDQAKVMESVETLVKNYVEKPKQIELHLTTAE ALVYAAQGTTSPAGRDMWTETEDDFKKRVSQEGDTKIEWYLEQLLKKYIRSPNPHLRQAAVIWLLALVKKCGYHSALQGQ LSQIQAAFMSMLSENDGKLMSAFLSGLGDRNSSVRKSYSSALGQLVKVAKDSSVEKLIIKLRSWYLEKEEESARHACGQT LHAMSTHSPDILKRHATLAMPLAFFAMHEKKSEAEENKKKHSDDNLSIWEEVWLEVTPGTEAGLRLYIQEIVQLLGETIE SQSWNTKAQAASAMSTVASKLQSNLGHPHLGKLLTALLTGLQGRTWTGKEALLQAIDTVCTFCKGAITDGNEGQPTLTQI TEAVMKECRKDNVTYKLEACRCMGNILELYSVDRFSDMWNIFSPVLLKDDKKDDDEDEIKPNMTQSRLECYYEVLEEL |
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