Gene
| Gene Model ID | pfu_aug1.0_8075.1_45804 |
|---|---|
| Locus | scaffold8075.1 : 18066 ... 43200 : + |
| To GenomeBrowser | scaffold8075.1:18066..43200 |
| Genes list of scaffold | scaffold8075.1 |
| Synonym | pfu_aug2.0_355.1_17327 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8075.1_45804.t1 | 2 | 1 | DUF3657 | 30 | 77 | 4.3e-17 | 61.9 | 1.0e-15 | 3.8e-12 | 46.1 |
| pfu_aug1.0_8075.1_45804.t1 | 2 | 2 | DUF3657 | 210 | 250 | 4.3e-17 | 61.9 | 3.8e-06 | 0.014 | 15.4 |
| pfu_aug1.0_8075.1_45804.t1 | 1 | 1 | DUF676 | 802 | 963 | 0.0 | 169.8 | 0.0 | 0.0 | 168.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8075.1_45804.t1 | gi|301620159|ref|XP_002939445.1| | PREDICTED: protein FAM135A isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8075.1_45804.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8075.1_45804.t1 atgagtgatctccaagctacgcttgaattttctgtggagttcagcaagttttataatgtggacttgtttcagcgaggacc ccagggacttcaggagaagatggagaatgtcagtcagaggaccatggcccttcattttagtcctaccaagggtttacatc atcatataccactactctttgattacttccatctctgtgctgtggaacttacggttcacggtacccttatagcactacac caaccttatattaatatgccaaaagctcccaaatctgcgtggactaacaagtctggtagtgatcaaccgtcaactcttga aatggtttactttggaagtagaacagtgtcaggggatcccataaatagctcgaccatgaaactgcacaatgcctataatg tacacaaacgactgtgtaaaattctgctatgtgcttatgaaaccttgcagtctacctttaacctgtacctatcaaaaatg aaagatgctgaattcaatcttgatataaaagactgtcataaaagactggagacaattgttaacaatctgcagaactttga taatgaagaggatttgttacaaacggcaaccacagacatcacgcaattatgtgccgagaacgtcatcttatggacccagt tcttggaagttgtttcccttgacaaaaacgtccttgtttacttagctaaggaacatcacatcacaagggtaaaacgattt gcagagggatttttcacccatgactattcaaaaccagaatgcctttcttgctatgaaccaaattaccatggacacacaga ttctgctgccatggtaaagagctcaccttacttccagaatttaccagcccttacagtagagtgtgtggagctagatggtg accataccacattgccagttatatttgaggatgtatactgtgaccatgtagtgaacaatagtgataaaccaagagcagct cttcagtcctccaaaaggaaagacaactcaacctcaagggtagataaatcaaatgaatcatcaacaaagtttaagcagaa gaggaaatttattaaaaacatacgtccagatgcatttcgtcggccttcatcatactctatgtccgaggcagatgccatta aatctaaagacccaaaacctgactgcacactcataggatatcgtaaaaaagacatgacatcagagtccgaaaaggactgc acctcggccagttctgtagtgttagggactttcagtccgttaccagtcctaggtgacgatggtaaaccactttgtacctc tgcctcactaccatctttatttgttaggtctagctggagtagaactagcattaactcacttccagagtttgtcgattcac aaaactcaccagctggtcgacgaaaggatataaaatctgaaattttcacttcagatcttaaaagtatagaaacagggtta aggtctcagagtagggcaaaacgtcggagtgggaggcttgcagagaaaagtttatcagaggatcatactgcaagtactgt tagagaggtttctatatctgaactcagtttggacgatgcagctattgttgaaaagttaggactcagtgaaaacaatgagc gatcagttgatgaaaagtcatttaatttgctagagaatgttgaaaatgatgcaaatgaagatgaaagttggtatgtaaca tccaatatggaagccaatgaagatcttagtgatgatgaaactcacgttgctaacggctatgacccagtcatagaaaaaca aactcaacgaatgatacaaaactcttcttgcaatgacagtagcaaaattgcttcaaagtcatcatataaaggtgcaggct tatcgaaggataggcaagctctcttagttgaaggtaaggatgggtcaacaccaagtctttcaaaggatagcggcataatc attcagggctcggaggaatcagacagtggaggggacgaaaaggtcacaattatagaatttctgaggcaggagtatggcaa gaatccaaacatgataaagaaggccggcaatagtcaggaaaagagtgatggttctctatcacaccaacgtgcagctagtg atacaaacttatttacaggtgtagaaagttcatcttcctcaggatcagtgcaaacaatggtgtcagaacctcagagccac tctttgaagaagagtggcgtgccatcttcgttttcctttccagaactctccaaatactcagacagtgacagaccactcct ggtcactcagattccacatagtaccctcagctttgtacagctccgagagacactcaagtcccaaatgaagtatgaaggcc aactttatagtgagtttgccaccttggcttccccgttcccgtacttcctacttacagatgatattcctgatgatgacggg ggcatccaccttgttgtatgtgttcatggccttgatggtaacagtgcagatttacgcctcgtaaggacgtacattgaaat ggctcttcctggatttagaattgaatttcttatgtcagagagaaatcaggatacatttgctgattttgatctgatgacag atagacttgccaatgaaatcttgaattatatagaactgtatggaattaaccctgcaaaaataagttttgtaggtcactcc ctcgggaatctcatcattaggtctgtgattgcattgccaaaacttgcacatttagttcctaagctttataccctcctatc cctatctggaccacatctaggtacactgtataacagtagtggtcttgttaatgctggtatgtggtttatgcagaaatgga agaaatctggatctctactccaattatctctgaaggaccatcctgaccccagacaaacattcctctataaactcagccaa aaaccaggagcaatatatagtgagatggtggccaatattttgacgccagttgtaaataatccaaagtgccgtttgattcg ttacgatgtgtttcattccctcccaagcaatgccaacactatgattggacgtgcagctcacattgcagttttggattccg agctcttcatcgagaaattcatgactgttgccgggctcaagttcttcagatag |
|
Protein
| Protein ID | pfu_aug1.0_8075.1_45804.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8075.1_45804.t1 MSDLQATLEFSVEFSKFYNVDLFQRGPQGLQEKMENVSQRTMALHFSPTKGLHHHIPLLFDYFHLCAVELTVHGTLIALH QPYINMPKAPKSAWTNKSGSDQPSTLEMVYFGSRTVSGDPINSSTMKLHNAYNVHKRLCKILLCAYETLQSTFNLYLSKM KDAEFNLDIKDCHKRLETIVNNLQNFDNEEDLLQTATTDITQLCAENVILWTQFLEVVSLDKNVLVYLAKEHHITRVKRF AEGFFTHDYSKPECLSCYEPNYHGHTDSAAMVKSSPYFQNLPALTVECVELDGDHTTLPVIFEDVYCDHVVNNSDKPRAA LQSSKRKDNSTSRVDKSNESSTKFKQKRKFIKNIRPDAFRRPSSYSMSEADAIKSKDPKPDCTLIGYRKKDMTSESEKDC TSASSVVLGTFSPLPVLGDDGKPLCTSASLPSLFVRSSWSRTSINSLPEFVDSQNSPAGRRKDIKSEIFTSDLKSIETGL RSQSRAKRRSGRLAEKSLSEDHTASTVREVSISELSLDDAAIVEKLGLSENNERSVDEKSFNLLENVENDANEDESWYVT SNMEANEDLSDDETHVANGYDPVIEKQTQRMIQNSSCNDSSKIASKSSYKGAGLSKDRQALLVEGKDGSTPSLSKDSGII IQGSEESDSGGDEKVTIIEFLRQEYGKNPNMIKKAGNSQEKSDGSLSHQRAASDTNLFTGVESSSSSGSVQTMVSEPQSH SLKKSGVPSSFSFPELSKYSDSDRPLLVTQIPHSTLSFVQLRETLKSQMKYEGQLYSEFATLASPFPYFLLTDDIPDDDG GIHLVVCVHGLDGNSADLRLVRTYIEMALPGFRIEFLMSERNQDTFADFDLMTDRLANEILNYIELYGINPAKISFVGHS LGNLIIRSVIALPKLAHLVPKLYTLLSLSGPHLGTLYNSSGLVNAGMWFMQKWKKSGSLLQLSLKDHPDPRQTFLYKLSQ KPGAIYSEMVANILTPVVNNPKCRLIRYDVFHSLPSNANTMIGRAAHIAVLDSELFIEKFMTVAGLKFFR |
|