Gene
| Gene Model ID | pfu_aug1.0_808.1_22310 |
|---|---|
| Locus | scaffold808.1 : 13558 ... 24425 : - |
| To GenomeBrowser | scaffold808.1:13558..24425 |
| Genes list of scaffold | scaffold808.1 |
| Synonym | pfu_aug2.0_925.1_17939 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_808.1_22310.t1 | 1 | 1 | PRELI | 15 | 130 | 8.1e-33 | 113.2 | 1.3e-36 | 9.9e-33 | 112.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_808.1_22310.t1 | gi|156374137|ref|XP_001629665.1| | predicted protein [Nematostella vectensis] | 2.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_808.1_22310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_808.1_22310.t1 atgaaatattttcaagatatcggcactattaatttcaagtgggatcaagtggccaacgctttttggcaacggtacccaaa tcccttcagcaagcatgtgctaagcgaagacgtcatatcacgtcacgtcgacgacaagaaattattcaccaagcgcttgt tgaaaaagacgaacgtgaagacgggtccagtacagcgagtggtcggtagcgctagtttcactttcgtggttgaagaatca atcgtagatccggtaaagaaaatcatcacgacgtacacccgaaatatcggattgacgaagttcgtttacgtcgacgagaa atgtgtgtataaagtcaatcctaacaattcagattctgtcgtctgcgagaaacaggcttgggtggaatcgccgcggtcgg gatgtatcgttgtgtatcgtttgaatggaagatgtatcgtgatacgtttcgtcaagctactgtatcgcgatatgagtaca aacgatatatcgttacaccactag |
|
Protein
| Protein ID | pfu_aug1.0_808.1_22310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_808.1_22310.t1 MKYFQDIGTINFKWDQVANAFWQRYPNPFSKHVLSEDVISRHVDDKKLFTKRLLKKTNVKTGPVQRVVGSASFTFVVEES IVDPVKKIITTYTRNIGLTKFVYVDEKCVYKVNPNNSDSVVCEKQAWVESPRSGCIVVYRLNGRCIVIRFVKLLYRDMST NDISLHH |
|