Gene
| Gene Model ID | pfu_aug1.0_808.1_22312 |
|---|---|
| Locus | scaffold808.1 : 50394 ... 59795 : - |
| To GenomeBrowser | scaffold808.1:50394..59795 |
| Genes list of scaffold | scaffold808.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_808.1_22312.t1 | 1 | 1 | Patatin | 4 | 145 | 5.5e-08 | 32.9 | 1.5e-11 | 7.6e-08 | 32.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_808.1_22312.t1 | gi|148223243|ref|NP_001086854.1| | phospholipase A2, group 6 (cytosolic, calcium-independent) [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_808.1_22312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_808.1_22312.t1 atgatgggtatgtacatgagactgaaggatgaagtcttccaaggaaagaggccttactcctccgagaggtttgaagaatt actaagacaggagatcggtgaaaaaatggtcatgacagatataaagaatccaaaagtgatgctatttggtctgatggctg atcgtttcccggcggagatgcatgtgttccgttcctacgagccgaccgtagttcatgagcctaagactccaatgaagagg aacgacagcactgataagaaaaagaaagataaaaaagacaaagatccggaagagcaatgttttaaaccgttacctcccca tgaacaacttatttggaaggcggtacgttccagtggagcagcaccaacctattttaaggcctctgacgcttttttggacg gcggtcttatatctaacaaccctacattagacgtactgacagaaatacaggagtacaatttggggctcaaacttaagaac agaaaagaggaggttcaggacattggcttggtgctctccctagggacgggaaaacagcctaaagtttatagtggtgcttt tgacgtttacatgccggagggattatcagacgtcactagagtggcacaaggagctaataacctgattaagattcttgttg accagatatcctacgacattcctcttgacacaaacgacgacaaagtattgaccaaactgatgtgggatgcacaagtttac attgtagctaacaaggagaaaataaggaaaattgcggaactaataaatcgctag |
|
Protein
| Protein ID | pfu_aug1.0_808.1_22312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_808.1_22312.t1 MMGMYMRLKDEVFQGKRPYSSERFEELLRQEIGEKMVMTDIKNPKVMLFGLMADRFPAEMHVFRSYEPTVVHEPKTPMKR NDSTDKKKKDKKDKDPEEQCFKPLPPHEQLIWKAVRSSGAAPTYFKASDAFLDGGLISNNPTLDVLTEIQEYNLGLKLKN RKEEVQDIGLVLSLGTGKQPKVYSGAFDVYMPEGLSDVTRVAQGANNLIKILVDQISYDIPLDTNDDKVLTKLMWDAQVY IVANKEKIRKIAELINR |
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