Gene
| Gene Model ID | pfu_aug1.0_808.1_22313 |
|---|---|
| Locus | scaffold808.1 : 69710 ... 84365 : - |
| To GenomeBrowser | scaffold808.1:69710..84365 |
| Genes list of scaffold | scaffold808.1 |
| Synonym | pfu_aug2.0_925.1_17936 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_808.1_22313.t1 | 1 | 1 | HAUS2 | 15 | 115 | 7.1e-21 | 74.5 | 1.9e-24 | 9.3e-21 | 74.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_808.1_22313.t1 | gi|260801351|ref|XP_002595559.1| | hypothetical protein BRAFLDRAFT_117486 [Branchiostoma floridae] | 1.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_808.1_22313.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_808.1_22313.t1 atgtacccttttgctttcgggtcccaagtgtattttacatttttacaacagttagatctggacatagagaagagaatgtt ggatagggagaccaaagacttaacttacaccagtatgttggaggagaagatcaaggttattcaggagcttaacaaccatc ttcagtcggtgatcgacagtaaatcacagcttatcacccggttacaacagccgtttgtaggagattacataaagctagag gcacagtatcacagatttgctagtgaactatttccacagatagcgactatgatggcagacttcaataatcatctagaaaa tatcacttggaataaatctttgtcttttgatgatggcaaactgagttttaggatcatttccatagattttgatgacgtcc taatttgtctacatcagataccgtcccaaatgggaggacttcgacttaacgagtataaaatacacgaagaaaatgacttt ggacttcgaaattacttcgagataagcgaaattttgagataa |
|
Protein
| Protein ID | pfu_aug1.0_808.1_22313.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_808.1_22313.t1 MYPFAFGSQVYFTFLQQLDLDIEKRMLDRETKDLTYTSMLEEKIKVIQELNNHLQSVIDSKSQLITRLQQPFVGDYIKLE AQYHRFASELFPQIATMMADFNNHLENITWNKSLSFDDGKLSFRIISIDFDDVLICLHQIPSQMGGLRLNEYKIHEENDF GLRNYFEISEILR |
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