Gene
| Gene Model ID | pfu_aug1.0_8084.1_53095 |
|---|---|
| Locus | scaffold8084.1 : 8355 ... 16835 : - |
| To GenomeBrowser | scaffold8084.1:8355..16835 |
| Genes list of scaffold | scaffold8084.1 |
| Synonym | pfu_aug2.0_432.1_07514 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8084.1_53095.t1 | 2 | 1 | DAP_epimerase | 9 | 94 | 8.5e-33 | 112.8 | 2.6e-23 | 3.8e-19 | 68.7 |
| pfu_aug1.0_8084.1_53095.t1 | 2 | 2 | DAP_epimerase | 140 | 263 | 8.5e-33 | 112.8 | 3.3e-15 | 4.9e-11 | 42.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8084.1_53095.t1 | gi|325105470|ref|YP_004275124.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8084.1_53095.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8084.1_53095.t1 atggcacatgcaaatacactacgattttcaaaataccacggattggggaatgattttgttatggtcgacaacaggaaagg catgcacatgctttatgaggacaacatccggttcctgtgtcatcgacgacttggaatcggtgccgacggtttgatagaaa tcaacgaatcgtcgactgttgattacgacttcggtttcgactattacaattcggatggtcgaataggaagtctttgtgga aatggatgtcgatgcgcattgcaatttgcgtcgaatctgggtatgatacgaaagttcgaatgggttaaatttcatgtaaa cgactgtatatacagcggggtggtcgtagaagactgtatgcgcatgaagtttgaaaatgtgaaaaaatgtgacgttattc agagagattcgcaatcattctttctggatacaggttcgccgcacgtggtgaattttgttccagataattcaacggtgaac gttttcgaagagggtcgaaaaattcgatacagttctgaatatgaaacaaagggtgtcaatgttaactatgtcagcctaga gtcggatattttatgtgttcgcacgtacgaaagaggtgttgaggaagagacctttgcttgcgggacaggtgcagtagctt ccgctttagcatatcatcgcatgactaatactacttccgcttcctgtgaaagccattcaactgtcattaagttccgattt ggaaaactgaaagtcatattcgtcagctcggaggatatatattctgatattgtattagagggcccagccaaacatgtgtt cgatggcgaaatagcttttgataagaagtag |
|
Protein
| Protein ID | pfu_aug1.0_8084.1_53095.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8084.1_53095.t1 MAHANTLRFSKYHGLGNDFVMVDNRKGMHMLYEDNIRFLCHRRLGIGADGLIEINESSTVDYDFGFDYYNSDGRIGSLCG NGCRCALQFASNLGMIRKFEWVKFHVNDCIYSGVVVEDCMRMKFENVKKCDVIQRDSQSFFLDTGSPHVVNFVPDNSTVN VFEEGRKIRYSSEYETKGVNVNYVSLESDILCVRTYERGVEEETFACGTGAVASALAYHRMTNTTSASCESHSTVIKFRF GKLKVIFVSSEDIYSDIVLEGPAKHVFDGEIAFDKK |
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