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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_809.1_58256
Locus scaffold809.1 : 1 ... 11375 : -
To GenomeBrowser scaffold809.1:1..11375
Genes list of scaffold scaffold809.1
Synonym pfu_aug2.0_1436.1_21619

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_809.1_58256.t1 1 1 Mnd1 1 104 1.7e-30 106.1 1.7e-33 1.8e-30 105.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_809.1_58256.t1 gi|346470677|gb|AEO35183.1| 2.0e-25

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_809.1_58256.t1
Definition-
>pfu_aug1.0_809.1_58256.t1
atgtccgtcaaagagatcctgaccagtttagttgacgatggcatggtggatacagacaagataggcacgtctgtgtattt
ctgggcattccctagtaaagccagtcaaaatagaaaacgcaagatagatgacctgaaaggcaggatacaagatcttgatt
cccgtaaaaagatgttgacagatgctgtgaccaaagccaaaattgggaaagaagacacgaatgagagaacagaattacta
tcacaacttgaagagaagagagccgtggtatctaggttatctacagagatagagaagtacagagaatgtgat

Protein
Protein IDpfu_aug1.0_809.1_58256.t1
Definition-
>pfu_aug1.0_809.1_58256.t1
MSVKEILTSLVDDGMVDTDKIGTSVYFWAFPSKASQNRKRKIDDLKGRIQDLDSRKKMLTDAVTKAKIGKEDTNERTELL
SQLEEKRAVVSRLSTEIEKYRECD

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