Gene
| Gene Model ID | pfu_aug1.0_8091.1_02543 |
|---|---|
| Locus | scaffold8091.1 : 4676 ... 25933 : + |
| To GenomeBrowser | scaffold8091.1:4676..25933 |
| Genes list of scaffold | scaffold8091.1 |
| Synonym | pfu_aug2.0_325.1_17295 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8091.1_02543.t1 | 2 | 1 | DUF2404 | 37 | 46 | 4.1e-13 | 49.2 | 0.44 | 6500.0 | -2.7 |
| pfu_aug1.0_8091.1_02543.t1 | 2 | 2 | DUF2404 | 176 | 240 | 4.1e-13 | 49.2 | 8.7e-17 | 1.3e-12 | 47.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8091.1_02543.t1 | gi|126308398|ref|XP_001368889.1| | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_8091.1_02543.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8091.1_02543.t1 atgcgacatttgcgaagcccagcgcgagccctgagcgcaacatccaagtcccttgaggaagataagatttcaggtctgaa gagtaagttgaagacaaacttcacagacatcaaagcaaaagttgtcaaaaaattggaggactttcatcacgacatttctt cctcaccagatagtgatactgagaggaatgtggaggaagaagatgatgaaaaggcagacggtaatagtgaagtaacactt gttgtacaggcagacactgagaccaaaaagtctgaaaattccgaaaatgatgggaaaattgatactgaaatagaaacgga agaaaaagtgtcagaaactgtagctgatcaggaggagtttcaaatcgtagatgatttctacgatactgacaccacatcat tacaatcctctatatcagctatacctacagcacctgaaattcgatatcgtaataagtcattgcctcaaaaactgaaacca aagagtaaagggacaagtgtagtttccgctgctcccgtgtctttgtcaaatatccgagagcatgcccagacaccatactt cattgagaagctcaagcttacagacatcaatctgggatctgttatgccagttttgaggaaggcctcccgtccatactttg atgaagatggattatgggtaaatctagcgttaaactacggtggagggttcaaaatgaccatagaaactaaagtcaacttg atgaagttacgggatgtcgaagtcaagagggcagaaagagagacaaaggaaaaagagaaagcaaggaaaaaactggccat attagatgagaatgaagaggacagtgcagagtcatctacagatgaagaggaggaaaattctctaacaggatcaaatgagg aagggtaa |
|
Protein
| Protein ID | pfu_aug1.0_8091.1_02543.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8091.1_02543.t1 MRHLRSPARALSATSKSLEEDKISGLKSKLKTNFTDIKAKVVKKLEDFHHDISSSPDSDTERNVEEEDDEKADGNSEVTL VVQADTETKKSENSENDGKIDTEIETEEKVSETVADQEEFQIVDDFYDTDTTSLQSSISAIPTAPEIRYRNKSLPQKLKP KSKGTSVVSAAPVSLSNIREHAQTPYFIEKLKLTDINLGSVMPVLRKASRPYFDEDGLWVNLALNYGGGFKMTIETKVNL MKLRDVEVKRAERETKEKEKARKKLAILDENEEDSAESSTDEEEENSLTGSNEEG |
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