Gene
| Gene Model ID | pfu_aug1.0_811.1_58265 |
|---|---|
| Locus | scaffold811.1 : 92976 ... 112210 : + |
| To GenomeBrowser | scaffold811.1:92976..112210 |
| Genes list of scaffold | scaffold811.1 |
| Synonym | pfu_aug2.0_331.1_04006 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_811.1_58265.t1 | 2 | 1 | TIP120 | 66 | 90 | 4.2e-40 | 137.0 | 0.27 | 1400.0 | -1.3 |
| pfu_aug1.0_811.1_58265.t1 | 2 | 2 | TIP120 | 151 | 271 | 4.2e-40 | 137.0 | 1.69557e-43 | 8.5e-40 | 136.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_811.1_58265.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_811.1_58265.t1 atggtgtcgtcaagacattcaaatcatgtgtactatgttgatttacagattatcaagatatgtttggtgtacctatgtca tgatcctaactataattatgatgatgatgacgacgacagtgccatggagacagaagaggatgatgaagatgatgatgatg atgaggagtacagtgatgacgatgatatgagttggaaggtacggagggccgctgctaagtgtgtagacgctatcatagcc accaggcatgaaatgctgatggaattctacaaaaatgtctctccggctcttatagctagattcaaagaacgtgaagaaaa tgtgaaagctgatattttccatgcgtacattacactattacgacagacaagacctacgatgtcatcatcagatcctgatg ccatggatcaagatggcggaaaattcatccaatctaatcaaaatctacacgctgcgtttgagtgtatgtacaccttactg gactcgtgcctggacagactggacatttttgagttcctgaatcatgtagaggacggactgaaggatcattacgacatcaa aatgctgacgtatctaatgctcgtacgactcgctcatctctgtcctaatgccgtactacaaagacttgaccgtctggtag aacctttaagatcgacatgtacaaccaaagtgaaagctcattcagtgaagcaggaatttgagaagcaagatgaactgaag aggtcagcgatgagggctgtagcttctttattggccatacctgatgcagacaaaagtccccagatgaacgaattcctctc ccaaattaaggctagtacggaactctctgtgatgtttgacagtatacagaaagacgctcaatcctcctcctccgatgtca tggtgatggacacaagctag |
|
Protein
| Protein ID | pfu_aug1.0_811.1_58265.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_811.1_58265.t1 MVSSRHSNHVYYVDLQIIKICLVYLCHDPNYNYDDDDDDSAMETEEDDEDDDDDEEYSDDDDMSWKVRRAAAKCVDAIIA TRHEMLMEFYKNVSPALIARFKEREENVKADIFHAYITLLRQTRPTMSSSDPDAMDQDGGKFIQSNQNLHAAFECMYTLL DSCLDRLDIFEFLNHVEDGLKDHYDIKMLTYLMLVRLAHLCPNAVLQRLDRLVEPLRSTCTTKVKAHSVKQEFEKQDELK RSAMRAVASLLAIPDADKSPQMNEFLSQIKASTELSVMFDSIQKDAQSSSSDVMVMDTS |
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