Gene
| Gene Model ID | pfu_aug1.0_812.1_22321 |
|---|---|
| Locus | scaffold812.1 : 18279 ... 21865 : - |
| To GenomeBrowser | scaffold812.1:18279..21865 |
| Genes list of scaffold | scaffold812.1 |
| Synonym | pfu_aug2.0_258.1_27127 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_812.1_22321.t1 | 3 | 1 | zf-CDGSH | 20 | 53 | 7.3e-17 | 60.9 | 1.2e-15 | 1.7e-11 | 43.7 |
| pfu_aug1.0_812.1_22321.t1 | 3 | 2 | zf-CDGSH | 69 | 89 | 7.3e-17 | 60.9 | 4.7e-10 | 7.0e-06 | 25.7 |
| pfu_aug1.0_812.1_22321.t1 | 3 | 3 | zf-CDGSH | 108 | 118 | 7.3e-17 | 60.9 | 0.24 | 3500.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_812.1_22321.t1 | gi|320162976|gb|EFW39875.1| | 3.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_812.1_22321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_812.1_22321.t1 atgtcaacatcacagtcaaatgaatgtcagcagcaacattatcccgctgtttctatgtatggaccttgtacggttgccaa tttagagcctggccagaccaagttatggtgtgcctgtggtccgagtaaaaaccagccttggtgtgatggttctcacaagg gtaccggtatcagcccattaaaatggacagtaaagaaaaaacagagactgcatcaaatatgtgcgtgtaaatataccaaa gatccgccttactgtgacgctacccacacaaacttgccgtgtcaggtcttagatagacaggagaaatgtccgctaaaatc agacagtcataatactcaaactaagctttgtacaggatgtggatggataccagacttctaa |
|
Protein
| Protein ID | pfu_aug1.0_812.1_22321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_812.1_22321.t1 MSTSQSNECQQQHYPAVSMYGPCTVANLEPGQTKLWCACGPSKNQPWCDGSHKGTGISPLKWTVKKKQRLHQICACKYTK DPPYCDATHTNLPCQVLDRQEKCPLKSDSHNTQTKLCTGCGWIPDF |
|