Gene
| Gene Model ID | pfu_aug1.0_8120.1_02549 |
|---|---|
| Locus | scaffold8120.1 : 14976 ... 19260 : + |
| To GenomeBrowser | scaffold8120.1:14976..19260 |
| Genes list of scaffold | scaffold8120.1 |
| Synonym | pfu_aug2.0_671.1_04465 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8120.1_02549.t1 | 1 | 1 | Pkinase | 7 | 145 | 1.3e-33 | 116.2 | 4.7e-37 | 2.3e-33 | 115.4 |
| pfu_aug1.0_8120.1_02549.t1 | 1 | 1 | Pkinase_Tyr | 9 | 141 | 3.6e-16 | 59.0 | 1.1e-19 | 5.3e-16 | 58.4 |
| pfu_aug1.0_8120.1_02549.t1 | 1 | 1 | Kinase-like | 11 | 133 | 2.1e-06 | 26.9 | 6.9e-10 | 3.4e-06 | 26.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8120.1_02549.t1 | gi|260832267|ref|XP_002611079.1| | hypothetical protein BRAFLDRAFT_70429 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8120.1_02549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8120.1_02549.t1 atgttgtgtgataacacgacacacaaacatttcataattcatcgagatctcaaggctgagaatgtgttctatgctgggtc aaggttagtcaaaattggcgatttcggttttagtacgctgagtcgaccagatcaaacgctaaacactttctgtggttcgc caccgtacgccgctcccgaacttttcaaagacgagagctactttgggacgtatgtggatatttgggctcttggaattatg ttgtatttcatggtgaccggagtgatgccttttagagcagacactgtagcaagattgaagaagtgcattttggaaggtac atacactataccatcgtacgtgtcggatagttgtcagtttcttatacgtagtattctaaaaccggtacctcaggaccgct ttactctgacagaaatccgaaactgcgagtggttagaaggccaggaattccctcacgaactggaaccttataatctccat ccgggcaacgaaaaagagaatttatcagaagaggagcatgatgcgcgcaagattctaagtgatctcggcatcacagacga acacttccggtccggaagtcgagattctaggagcagtattactggtacttataggattgtgttgcataaggtccaaaaga agaaatccggtcttggtgattcagaaacagacataacagtccgtcctgagaataacgccgagccacgttcaagacattcc gtcatgaccaaggcgaaacaagagtctaaactatgcgttattttgtga |
|
Protein
| Protein ID | pfu_aug1.0_8120.1_02549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8120.1_02549.t1 MLCDNTTHKHFIIHRDLKAENVFYAGSRLVKIGDFGFSTLSRPDQTLNTFCGSPPYAAPELFKDESYFGTYVDIWALGIM LYFMVTGVMPFRADTVARLKKCILEGTYTIPSYVSDSCQFLIRSILKPVPQDRFTLTEIRNCEWLEGQEFPHELEPYNLH PGNEKENLSEEEHDARKILSDLGITDEHFRSGSRDSRSSITGTYRIVLHKVQKKKSGLGDSETDITVRPENNAEPRSRHS VMTKAKQESKLCVIL |
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