Gene
| Gene Model ID | pfu_aug1.0_8126.1_38710 |
|---|---|
| Locus | scaffold8126.1 : 15988 ... 22445 : - |
| To GenomeBrowser | scaffold8126.1:15988..22445 |
| Genes list of scaffold | scaffold8126.1 |
| Synonym | pfu_aug2.0_2926.1_22235 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8126.1_38710.t1 | 1 | 1 | Ank_2 | 27 | 97 | 1.2e-07 | 31.9 | 4.7e-11 | 1.4e-07 | 31.7 |
| pfu_aug1.0_8126.1_38710.t1 | 3 | 1 | Ank_5 | 30 | 48 | 4.6e-06 | 26.6 | 0.11 | 330.0 | 1.7 |
| pfu_aug1.0_8126.1_38710.t1 | 3 | 2 | Ank_5 | 42 | 74 | 4.6e-06 | 26.6 | 1.3e-06 | 0.0038 | 17.4 |
| pfu_aug1.0_8126.1_38710.t1 | 3 | 3 | Ank_5 | 61 | 83 | 4.6e-06 | 26.6 | 1.8e-05 | 0.054 | 13.7 |
| pfu_aug1.0_8126.1_38710.t1 | 1 | 1 | Ank | 66 | 98 | 1.3e-07 | 31.0 | 1.2e-10 | 3.6e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8126.1_38710.t1 | gi|348537359|ref|XP_003456162.1| | 8.0e-27 |
Transcript
| Transcript ID | pfu_aug1.0_8126.1_38710.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8126.1_38710.t1 gagcttgtaaacagatttaatttccatcactatgacaacttagttcacacacctaagaaagttgatcccacacagcagaa aatggctaatcgagcccttgatgcagtcagtttgttgtttggggcatataatggagatgtaacagctatgagaagatacc atcttctcggtatggacatgaatctttccgactacgacggacgtaccgccctccatctggcatcttctgagggtcatgag aaagtagttagcttcctgacagagaaatgtaaggtggatccattcctgaaagacagccatctttga |
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Protein
| Protein ID | pfu_aug1.0_8126.1_38710.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8126.1_38710.t1 ELVNRFNFHHYDNLVHTPKKVDPTQQKMANRALDAVSLLFGAYNGDVTAMRRYHLLGMDMNLSDYDGRTALHLASSEGHE KVVSFLTEKCKVDPFLKDSHL |
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