Gene
| Gene Model ID | pfu_aug1.0_81328.1_13236 |
|---|---|
| Locus | scaffold81328.1 : 1 ... 2465 : - |
| To GenomeBrowser | scaffold81328.1:1..2465 |
| Genes list of scaffold | scaffold81328.1 |
| Synonym | pfu_aug2.0_388.1_27328 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q83. 88 bits, 1e-15 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_81328.1_13236.t1 | 1 | 1 | C1q | 160 | 279 | 3.5e-19 | 69.0 | 2.1e-22 | 6.2e-19 | 68.2 |
Transcript
| Transcript ID | pfu_aug1.0_81328.1_13236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_81328.1_13236.t1 atgctcaatttggtgctctattgcaaggtatcatgtgttgaaaggattccattggccaaagttcagagtgaatttgatac aaaagtcaaacatctggaatcgattgtcatttcacacagcgcttcaatatccatcctacaggaatctttagtaaatgaag aaaggaaagttaaatcactgaataaatcgctcacagaagagcacgaacaagttgccattttaaaaggtttcttaaatgcc gaaatacttaaagttcagcaacttgatgcaaaagtgttggcactaaatggatcgttaatagaggaacagaaacaagtgac tatgttaaagagtatgttgaatgcagagcagctgaaagttcagcaactgaatacttcattgataccagtacaaaagtcgc acaagaaatgtatcgtcagaattgcagctttggaatctaaagtcaacatctccacccagcacatggttggttttacagca tgcaacacgttgagtaccactttgcgagatggacaaagagttgtttacaataaggttgtaacaaatgtaggaaatgccta tgatgcgatggatggcggattcaatgctccatataacgggctttactcttttactttcactggattggcttactctacag cagcgattcagcttcacctggtaaagaacggtgcctatgtcagtcaagtcctctctaacccacacatatatgattcatct actgctaccacaaatcttcagttacaagctggtgatgcagtttggatcatcaacggcagtggttctcagcaaaaattgca accttatgatgttaactgtttctctggaatgcttgtccgagaagtgtaa |
|
Protein
| Protein ID | pfu_aug1.0_81328.1_13236.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_81328.1_13236.t1 MLNLVLYCKVSCVERIPLAKVQSEFDTKVKHLESIVISHSASISILQESLVNEERKVKSLNKSLTEEHEQVAILKGFLNA EILKVQQLDAKVLALNGSLIEEQKQVTMLKSMLNAEQLKVQQLNTSLIPVQKSHKKCIVRIAALESKVNISTQHMVGFTA CNTLSTTLRDGQRVVYNKVVTNVGNAYDAMDGGFNAPYNGLYSFTFTGLAYSTAAIQLHLVKNGAYVSQVLSNPHIYDSS TATTNLQLQAGDAVWIINGSGSQQKLQPYDVNCFSGMLVREV |
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