Gene
| Gene Model ID | pfu_aug1.0_8146.1_02554 |
|---|---|
| Locus | scaffold8146.1 : 1876 ... 5168 : + |
| To GenomeBrowser | scaffold8146.1:1876..5168 |
| Genes list of scaffold | scaffold8146.1 |
| Synonym | pfu_aug2.0_548.1_27522 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8146.1_02554.t1 | 2 | 1 | 7tm_1 | 9 | 34 | 0.0 | 192.1 | 0.3 | 1100.0 | -1.5 |
| pfu_aug1.0_8146.1_02554.t1 | 1 | 1 | 7TM_GPCR_Srx | 48 | 174 | 6.4e-06 | 25.4 | 1.7e-09 | 6.4e-06 | 25.4 |
| pfu_aug1.0_8146.1_02554.t1 | 1 | 1 | 7TM_GPCR_Srsx | 51 | 329 | 9.6e-17 | 60.9 | 3.6e-20 | 1.3e-16 | 60.5 |
| pfu_aug1.0_8146.1_02554.t1 | 2 | 2 | 7tm_1 | 56 | 315 | 0.0 | 192.1 | 0.0 | 0.0 | 192.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8146.1_02554.t1 | gi|197209956|ref|NP_001127742.1| | neuropeptide receptor A7 [Bombyx mori] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8146.1_02554.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8146.1_02554.t1 atgatggatggaagcaccgtttttcctttcaacatttccaccttggtggatattaatacaacctccaacatcacagcgga acatccaccccaaattatgcagcaaaaatggctgacctgtatattcatcgtcttttatgctatcatctttttgttgggtg taagcggcaatacgctcgtggtttatgttgtggctagaaacaagtcaatgcagaccattacaaatatattcataaccaat ttagctgtatcggacattttgatgtgcttcttagctattccatttaccccccttggatatttcctgaattcgtggatgtt tggagaggtcctatgccatattgtgcccatgtcgcaggccataagtgtgtacgtctccacgctgacatcaacggcgatcg cggtcgacaggtatttcgtcattgtttatcccttcaagccccggatgaagatcttcgtgtgtcttcttatgatagtggcc atttggattatctcgatttccatctccctgccgttagggatatacatgagcttaaagccagatgacgacggaaacttcat gtgctcagaagattggccacgcccccaagctggtcagttcttcacggtcaccagccttgtccttcaatacgttgtgcctt gtagtattattacgtactgttacaccaaagtatctctagctcttaaaaagagatcgcgaaccaaaattggcagtggttcc aagaatagagaaagagacgaaatggaaattcgcagaaagcgaagaacaaataagatgttaatcgccatggttactatatt tgtatgttgttggttgcccttaaacattgctctgttgactgtagagtataacaaaatctattatcattggtattactata cactaatatttttccttgcacacgtgatagcgatgagctccacaatctacaatccattcttgtatgcctggatgaatgac aatttcaagaaggaattcaaaaccgtgttaccatgcctgtttcgcagagaccgagagagaccggttaacgggagttatac acaatacacccacgttgataatcagccttccgttattctgaaccggtccccacagaaagagacggacgaaatcaatgact caagaaggccgaaagcttattacgataccgaatctgaaaaagtgcagcttaatgtccaaaccgagacggacgattcggct taa |
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Protein
| Protein ID | pfu_aug1.0_8146.1_02554.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8146.1_02554.t1 MMDGSTVFPFNISTLVDINTTSNITAEHPPQIMQQKWLTCIFIVFYAIIFLLGVSGNTLVVYVVARNKSMQTITNIFITN LAVSDILMCFLAIPFTPLGYFLNSWMFGEVLCHIVPMSQAISVYVSTLTSTAIAVDRYFVIVYPFKPRMKIFVCLLMIVA IWIISISISLPLGIYMSLKPDDDGNFMCSEDWPRPQAGQFFTVTSLVLQYVVPCSIITYCYTKVSLALKKRSRTKIGSGS KNRERDEMEIRRKRRTNKMLIAMVTIFVCCWLPLNIALLTVEYNKIYYHWYYYTLIFFLAHVIAMSSTIYNPFLYAWMND NFKKEFKTVLPCLFRRDRERPVNGSYTQYTHVDNQPSVILNRSPQKETDEINDSRRPKAYYDTESEKVQLNVQTETDDSA |
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