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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8162.1_09701
Locus scaffold8162.1 : 1 ... 18835 : -
To GenomeBrowser scaffold8162.1:1..18835
Genes list of scaffold scaffold8162.1
Synonym pfu_aug2.0_275.1_17229

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_8162.1_09701.t1 2 1 Myosin_head 1 142 1.4013e-45 156.0 2.1e-33 4.4e-30 104.3
pfu_aug1.0_8162.1_09701.t1 2 2 Myosin_head 142 221 1.4013e-45 156.0 1.1e-17 2.4e-14 52.3
pfu_aug1.0_8162.1_09701.t1 2 1 IQ 238 256 5.3e-07 28.7 2.8e-05 0.059 13.0
pfu_aug1.0_8162.1_09701.t1 2 2 IQ 262 279 5.3e-07 28.7 4.7e-07 0.001 18.5
pfu_aug1.0_8162.1_09701.t1 1 1 FERM_M 331 875 3.5e-09 36.8 2.4e-11 5.1e-08 33.1
pfu_aug1.0_8162.1_09701.t1 1 1 SH3_9 600 646 4.4e-07 29.3 8.0e-10 1.7e-06 27.5

Transcript
Transcript IDpfu_aug1.0_8162.1_09701.t1
Definition-
>pfu_aug1.0_8162.1_09701.t1
atgaaggtcctcatgtttaaagactcggaagtctgggagatcctcaagattctagcggcacttctccatgtcggcaacat
caagtacaatgcaattgagatggacaacattgatgccagtgaagtccaagatattcaattcatcaacaaatctgccagac
ttctagaggtgaatccacaagatttaatagatgtactgacaacacgtaccattgtgacacgcggagagagtgttaccgta
acccttggaagagatggcgctgcagacgtaagggacgcgttcgtgaaaggaatttacggcagaatgtttgtatggatcgt
agacaaaataaatatcgctattttcaaggaaaaaaattctccgaagcaatttaggaccagtatcggcgtcttggatattt
ttggcttcgaaagttttgatcacaacagatccctgtgctgtaagcagctgcgatactctggtatgatggagaccatcagg
atacgacgtgctggttatcccatcaggcatcgcttcaaggactttgtagatcggtacaggatccttgcccacggtattgg
accttcccacaaagaggactgcagggccgcctcacaaaaaatctgtggtacggtgctacaggggaaagactatcagctag
gaaagactaaagtcttcttaaaggatgcccaagatgtgtacttggagcagtgcagagagaatgagatgaccaagaaaatc
ctgatactacagaaaacaatcagggcatggcattgtcgacgacgcttcctccgtatgaaggactgctctatcaccataca
aactgtatggagggcctacgctgccagaaaacgattcttaagggtatcatcattgggaagtggtggtgaccatgtcatgg
atgccatatcacagtgtgagcagtacgccaaagaacaaggagcgcaggaaaggaacgccccctggaggctattctttagg
aaggagatcttcgcaccgtggcacgatccaagcgaggaccagaatgccactaatctcatctaccagcaagtcgtcagagg
catcaagtttggtgaatacagatgtgataaggatgatgacctcggtatgatagcagctcaacaatactacatagaatacg
gcacaggagccaacgcagaaagacttcagtccctcgtcccctcgtatgtccctgattcatctctctcgggacagaacaga
atgcagacctggataacgatcattctgaacaaactcagatccccttacttctcaaacgacagaattaaaccactcaaagt
gaaagaagacattgttagttatgccaagtacaagtggccgttgctattttcacgattttacgaggcgtataaatttgctg
gaccaagtttgcctaagaacgatgtgattatagcagtgaattggacgggtgtttacgtcgtagatgatcaagaacaagtg
ttactggagttatctttccctgaaataacggctgtgtcaagtagcaggacaggtaagatgcatggacagagttttacctt
ggctacagtgaaggcagacgaatacacgttcacgtcccctaatgcagaggacatcagggacctggtggtgaccttcctgg
aaggactcaagaaaagatcaaaatacgttatagccctgcaagattactcctcacctgaggaatggattttgatttatcag
ggcatcttcttcaaaattctaattcacttgaatgtgttgactgaagaaaatcacttttatcacaatttattcactttatc
aaaaaaagaagcagaaaacaaaattaagcaaggggagggagccaatttcttgtcatttgccaaaggtgacctcattgtac
tagatcagcagaacggagagacggttatgaactcaggttggtgtgtaggagaatgtgtgcgcacagggaagaaaggagat
ttcccagcagaatgtgtgtacgttctacctaccatcacaaagccacctccagaaatattgaatttgttcattcagtccgg
ggaccaagcagataagatgctttcccccacccaccaggatcagcccatggaatcaggggataaaccccacaccctggagg
agtatgccctggaccacttcaggaatgggaccaggaaatacccaccacatcaagtagaagtggaggccatacaacataaa
acaacacagatcttgcataaagtttacttccctgatgatactgacgaggcttttgaggttgaatccagtacaagagccaa
agatttctgccataatattgcaacaaagctcatgttgaagtccagtgaaggattcagtttgtttgtcaagattgcagata
aagttatcagtgtaccagagggcgatttcttctttgactttgttcgacatctgacagactggatcaagaaggccagacct
agtagagatggaaatgtcccaacgtttacatatcaagtgttctttatgaagaagttatggacaaacacagtaccgggtaa
agatccccacgctgaccagatcttccattatcatcaaagtatcattggatatttcaatcgtaatgctggcacatcttcgg
aggatgccaaagtggaattcctgaaagttatttataaatggcccacctttggatccgccttctttgaggtgaaacagacg
acagaaccaaactaccctgaaattctcctgattgcaatcaataaacatggtgttaatctcattcatccacagtcaaag

Protein
Protein IDpfu_aug1.0_8162.1_09701.t1
Definition-
>pfu_aug1.0_8162.1_09701.t1
MKVLMFKDSEVWEILKILAALLHVGNIKYNAIEMDNIDASEVQDIQFINKSARLLEVNPQDLIDVLTTRTIVTRGESVTV
TLGRDGAADVRDAFVKGIYGRMFVWIVDKINIAIFKEKNSPKQFRTSIGVLDIFGFESFDHNRSLCCKQLRYSGMMETIR
IRRAGYPIRHRFKDFVDRYRILAHGIGPSHKEDCRAASQKICGTVLQGKDYQLGKTKVFLKDAQDVYLEQCRENEMTKKI
LILQKTIRAWHCRRRFLRMKDCSITIQTVWRAYAARKRFLRVSSLGSGGDHVMDAISQCEQYAKEQGAQERNAPWRLFFR
KEIFAPWHDPSEDQNATNLIYQQVVRGIKFGEYRCDKDDDLGMIAAQQYYIEYGTGANAERLQSLVPSYVPDSSLSGQNR
MQTWITIILNKLRSPYFSNDRIKPLKVKEDIVSYAKYKWPLLFSRFYEAYKFAGPSLPKNDVIIAVNWTGVYVVDDQEQV
LLELSFPEITAVSSSRTGKMHGQSFTLATVKADEYTFTSPNAEDIRDLVVTFLEGLKKRSKYVIALQDYSSPEEWILIYQ
GIFFKILIHLNVLTEENHFYHNLFTLSKKEAENKIKQGEGANFLSFAKGDLIVLDQQNGETVMNSGWCVGECVRTGKKGD
FPAECVYVLPTITKPPPEILNLFIQSGDQADKMLSPTHQDQPMESGDKPHTLEEYALDHFRNGTRKYPPHQVEVEAIQHK
TTQILHKVYFPDDTDEAFEVESSTRAKDFCHNIATKLMLKSSEGFSLFVKIADKVISVPEGDFFFDFVRHLTDWIKKARP
SRDGNVPTFTYQVFFMKKLWTNTVPGKDPHADQIFHYHQSIIGYFNRNAGTSSEDAKVEFLKVIYKWPTFGSAFFEVKQT
TEPNYPEILLIAINKHGVNLIHPQSK

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