Gene
Gene Model ID | pfu_aug1.0_8162.1_09701 |
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Locus | scaffold8162.1 : 1 ... 18835 : - |
To GenomeBrowser | scaffold8162.1:1..18835 |
Genes list of scaffold | scaffold8162.1 |
Synonym | pfu_aug2.0_275.1_17229 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8162.1_09701.t1 | 2 | 1 | Myosin_head | 1 | 142 | 1.4013e-45 | 156.0 | 2.1e-33 | 4.4e-30 | 104.3 |
pfu_aug1.0_8162.1_09701.t1 | 2 | 2 | Myosin_head | 142 | 221 | 1.4013e-45 | 156.0 | 1.1e-17 | 2.4e-14 | 52.3 |
pfu_aug1.0_8162.1_09701.t1 | 2 | 1 | IQ | 238 | 256 | 5.3e-07 | 28.7 | 2.8e-05 | 0.059 | 13.0 |
pfu_aug1.0_8162.1_09701.t1 | 2 | 2 | IQ | 262 | 279 | 5.3e-07 | 28.7 | 4.7e-07 | 0.001 | 18.5 |
pfu_aug1.0_8162.1_09701.t1 | 1 | 1 | FERM_M | 331 | 875 | 3.5e-09 | 36.8 | 2.4e-11 | 5.1e-08 | 33.1 |
pfu_aug1.0_8162.1_09701.t1 | 1 | 1 | SH3_9 | 600 | 646 | 4.4e-07 | 29.3 | 8.0e-10 | 1.7e-06 | 27.5 |
Transcript
Transcript ID | pfu_aug1.0_8162.1_09701.t1 |
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Definition | - |
>pfu_aug1.0_8162.1_09701.t1 atgaaggtcctcatgtttaaagactcggaagtctgggagatcctcaagattctagcggcacttctccatgtcggcaacat caagtacaatgcaattgagatggacaacattgatgccagtgaagtccaagatattcaattcatcaacaaatctgccagac ttctagaggtgaatccacaagatttaatagatgtactgacaacacgtaccattgtgacacgcggagagagtgttaccgta acccttggaagagatggcgctgcagacgtaagggacgcgttcgtgaaaggaatttacggcagaatgtttgtatggatcgt agacaaaataaatatcgctattttcaaggaaaaaaattctccgaagcaatttaggaccagtatcggcgtcttggatattt ttggcttcgaaagttttgatcacaacagatccctgtgctgtaagcagctgcgatactctggtatgatggagaccatcagg atacgacgtgctggttatcccatcaggcatcgcttcaaggactttgtagatcggtacaggatccttgcccacggtattgg accttcccacaaagaggactgcagggccgcctcacaaaaaatctgtggtacggtgctacaggggaaagactatcagctag gaaagactaaagtcttcttaaaggatgcccaagatgtgtacttggagcagtgcagagagaatgagatgaccaagaaaatc ctgatactacagaaaacaatcagggcatggcattgtcgacgacgcttcctccgtatgaaggactgctctatcaccataca aactgtatggagggcctacgctgccagaaaacgattcttaagggtatcatcattgggaagtggtggtgaccatgtcatgg atgccatatcacagtgtgagcagtacgccaaagaacaaggagcgcaggaaaggaacgccccctggaggctattctttagg aaggagatcttcgcaccgtggcacgatccaagcgaggaccagaatgccactaatctcatctaccagcaagtcgtcagagg catcaagtttggtgaatacagatgtgataaggatgatgacctcggtatgatagcagctcaacaatactacatagaatacg gcacaggagccaacgcagaaagacttcagtccctcgtcccctcgtatgtccctgattcatctctctcgggacagaacaga atgcagacctggataacgatcattctgaacaaactcagatccccttacttctcaaacgacagaattaaaccactcaaagt gaaagaagacattgttagttatgccaagtacaagtggccgttgctattttcacgattttacgaggcgtataaatttgctg gaccaagtttgcctaagaacgatgtgattatagcagtgaattggacgggtgtttacgtcgtagatgatcaagaacaagtg ttactggagttatctttccctgaaataacggctgtgtcaagtagcaggacaggtaagatgcatggacagagttttacctt ggctacagtgaaggcagacgaatacacgttcacgtcccctaatgcagaggacatcagggacctggtggtgaccttcctgg aaggactcaagaaaagatcaaaatacgttatagccctgcaagattactcctcacctgaggaatggattttgatttatcag ggcatcttcttcaaaattctaattcacttgaatgtgttgactgaagaaaatcacttttatcacaatttattcactttatc aaaaaaagaagcagaaaacaaaattaagcaaggggagggagccaatttcttgtcatttgccaaaggtgacctcattgtac tagatcagcagaacggagagacggttatgaactcaggttggtgtgtaggagaatgtgtgcgcacagggaagaaaggagat ttcccagcagaatgtgtgtacgttctacctaccatcacaaagccacctccagaaatattgaatttgttcattcagtccgg ggaccaagcagataagatgctttcccccacccaccaggatcagcccatggaatcaggggataaaccccacaccctggagg agtatgccctggaccacttcaggaatgggaccaggaaatacccaccacatcaagtagaagtggaggccatacaacataaa acaacacagatcttgcataaagtttacttccctgatgatactgacgaggcttttgaggttgaatccagtacaagagccaa agatttctgccataatattgcaacaaagctcatgttgaagtccagtgaaggattcagtttgtttgtcaagattgcagata aagttatcagtgtaccagagggcgatttcttctttgactttgttcgacatctgacagactggatcaagaaggccagacct agtagagatggaaatgtcccaacgtttacatatcaagtgttctttatgaagaagttatggacaaacacagtaccgggtaa agatccccacgctgaccagatcttccattatcatcaaagtatcattggatatttcaatcgtaatgctggcacatcttcgg aggatgccaaagtggaattcctgaaagttatttataaatggcccacctttggatccgccttctttgaggtgaaacagacg acagaaccaaactaccctgaaattctcctgattgcaatcaataaacatggtgttaatctcattcatccacagtcaaag |
Protein
Protein ID | pfu_aug1.0_8162.1_09701.t1 |
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Definition | - |
>pfu_aug1.0_8162.1_09701.t1 MKVLMFKDSEVWEILKILAALLHVGNIKYNAIEMDNIDASEVQDIQFINKSARLLEVNPQDLIDVLTTRTIVTRGESVTV TLGRDGAADVRDAFVKGIYGRMFVWIVDKINIAIFKEKNSPKQFRTSIGVLDIFGFESFDHNRSLCCKQLRYSGMMETIR IRRAGYPIRHRFKDFVDRYRILAHGIGPSHKEDCRAASQKICGTVLQGKDYQLGKTKVFLKDAQDVYLEQCRENEMTKKI LILQKTIRAWHCRRRFLRMKDCSITIQTVWRAYAARKRFLRVSSLGSGGDHVMDAISQCEQYAKEQGAQERNAPWRLFFR KEIFAPWHDPSEDQNATNLIYQQVVRGIKFGEYRCDKDDDLGMIAAQQYYIEYGTGANAERLQSLVPSYVPDSSLSGQNR MQTWITIILNKLRSPYFSNDRIKPLKVKEDIVSYAKYKWPLLFSRFYEAYKFAGPSLPKNDVIIAVNWTGVYVVDDQEQV LLELSFPEITAVSSSRTGKMHGQSFTLATVKADEYTFTSPNAEDIRDLVVTFLEGLKKRSKYVIALQDYSSPEEWILIYQ GIFFKILIHLNVLTEENHFYHNLFTLSKKEAENKIKQGEGANFLSFAKGDLIVLDQQNGETVMNSGWCVGECVRTGKKGD FPAECVYVLPTITKPPPEILNLFIQSGDQADKMLSPTHQDQPMESGDKPHTLEEYALDHFRNGTRKYPPHQVEVEAIQHK TTQILHKVYFPDDTDEAFEVESSTRAKDFCHNIATKLMLKSSEGFSLFVKIADKVISVPEGDFFFDFVRHLTDWIKKARP SRDGNVPTFTYQVFFMKKLWTNTVPGKDPHADQIFHYHQSIIGYFNRNAGTSSEDAKVEFLKVIYKWPTFGSAFFEVKQT TEPNYPEILLIAINKHGVNLIHPQSK |