Gene
| Gene Model ID | pfu_aug1.0_8199.1_67820 |
|---|---|
| Locus | scaffold8199.1 : 1 ... 6798 : + |
| To GenomeBrowser | scaffold8199.1:1..6798 |
| Genes list of scaffold | scaffold8199.1 |
| Synonym | pfu_aug2.0_308.1_27210 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8199.1_67820.t1 | 10 | 1 | zf-H2C2_2 | 10 | 41 | 3.8e-08 | 33.2 | 0.00024 | 0.7 | 10.2 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 1 | zf-C2H2 | 32 | 54 | 9.9e-17 | 60.2 | 0.0067 | 20.0 | 5.7 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 1 | zf-C2H2_6 | 32 | 54 | 9.1e-07 | 28.5 | 2.2e-06 | 0.0066 | 16.3 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 1 | zf-C2H2_4 | 33 | 49 | 1.3e-06 | 28.2 | 0.012 | 36.0 | 5.0 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 2 | zf-C2H2 | 159 | 180 | 9.9e-17 | 60.2 | 6.4e-06 | 0.019 | 15.2 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 2 | zf-H2C2_2 | 159 | 169 | 3.8e-08 | 33.2 | 0.54 | 1600.0 | -0.4 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 2 | zf-C2H2_6 | 159 | 180 | 9.1e-07 | 28.5 | 0.0017 | 5.2 | 7.1 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 2 | zf-C2H2_4 | 159 | 180 | 1.3e-06 | 28.2 | 1.8e-05 | 0.055 | 13.8 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 3 | zf-H2C2_2 | 175 | 196 | 3.8e-08 | 33.2 | 0.0004 | 1.2 | 9.5 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 3 | zf-C2H2 | 185 | 207 | 9.9e-17 | 60.2 | 5.5e-06 | 0.016 | 15.4 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 3 | zf-C2H2_6 | 185 | 192 | 9.1e-07 | 28.5 | 0.0091 | 27.0 | 4.8 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 3 | zf-C2H2_4 | 185 | 207 | 1.3e-06 | 28.2 | 4.1e-05 | 0.12 | 12.7 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 4 | zf-H2C2_2 | 200 | 219 | 3.8e-08 | 33.2 | 0.00023 | 0.67 | 10.3 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 4 | zf-C2H2_6 | 202 | 209 | 9.1e-07 | 28.5 | 0.92 | 2700.0 | -1.6 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 4 | zf-C2H2 | 212 | 234 | 9.9e-17 | 60.2 | 0.0015 | 4.3 | 7.8 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 5 | zf-C2H2_6 | 212 | 226 | 9.1e-07 | 28.5 | 0.058 | 170.0 | 2.2 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 4 | zf-C2H2_4 | 212 | 234 | 1.3e-06 | 28.2 | 5.9e-05 | 0.17 | 12.2 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 5 | zf-H2C2_2 | 225 | 246 | 3.8e-08 | 33.2 | 0.063 | 190.0 | 2.6 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 6 | zf-C2H2_6 | 238 | 247 | 9.1e-07 | 28.5 | 0.052 | 150.0 | 2.4 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 5 | zf-C2H2 | 239 | 249 | 9.9e-17 | 60.2 | 0.47 | 1400.0 | -0.1 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 6 | zf-C2H2 | 266 | 287 | 9.9e-17 | 60.2 | 0.0013 | 4.0 | 7.9 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 5 | zf-C2H2_4 | 266 | 287 | 1.3e-06 | 28.2 | 0.39 | 1200.0 | 0.2 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 6 | zf-H2C2_2 | 283 | 311 | 3.8e-08 | 33.2 | 0.069 | 210.0 | 2.5 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 7 | zf-C2H2 | 302 | 324 | 9.9e-17 | 60.2 | 3.8e-05 | 0.11 | 12.8 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 7 | zf-C2H2_6 | 302 | 312 | 9.1e-07 | 28.5 | 0.013 | 39.0 | 4.3 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 6 | zf-C2H2_4 | 302 | 324 | 1.3e-06 | 28.2 | 6.4e-05 | 0.19 | 12.1 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 7 | zf-H2C2_2 | 342 | 354 | 3.8e-08 | 33.2 | 0.03 | 89.0 | 3.6 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 8 | zf-C2H2_6 | 342 | 352 | 9.1e-07 | 28.5 | 0.0037 | 11.0 | 6.0 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 8 | zf-C2H2 | 344 | 365 | 9.9e-17 | 60.2 | 0.00011 | 0.32 | 11.4 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 7 | zf-C2H2_4 | 344 | 365 | 1.3e-06 | 28.2 | 0.00032 | 0.93 | 9.9 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 8 | zf-H2C2_2 | 361 | 381 | 3.8e-08 | 33.2 | 0.00036 | 1.1 | 9.7 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 9 | zf-C2H2_6 | 369 | 381 | 9.1e-07 | 28.5 | 0.00014 | 0.42 | 10.5 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 9 | zf-C2H2 | 370 | 392 | 9.9e-17 | 60.2 | 9.1e-05 | 0.27 | 11.6 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 8 | zf-C2H2_4 | 370 | 390 | 1.3e-06 | 28.2 | 0.0014 | 4.1 | 7.9 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 9 | zf-H2C2_2 | 385 | 411 | 3.8e-08 | 33.2 | 5.2e-06 | 0.016 | 15.5 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 10 | zf-C2H2_6 | 400 | 415 | 9.1e-07 | 28.5 | 3.7e-05 | 0.11 | 12.4 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 10 | zf-C2H2 | 401 | 423 | 9.9e-17 | 60.2 | 2.8e-05 | 0.083 | 13.2 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 9 | zf-C2H2_4 | 401 | 423 | 1.3e-06 | 28.2 | 0.00023 | 0.68 | 10.4 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 10 | zf-H2C2_2 | 415 | 439 | 3.8e-08 | 33.2 | 2.6e-05 | 0.076 | 13.3 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 11 | zf-C2H2 | 429 | 439 | 9.9e-17 | 60.2 | 0.00042 | 1.2 | 9.5 |
| pfu_aug1.0_8199.1_67820.t1 | 11 | 11 | zf-C2H2_6 | 429 | 439 | 9.1e-07 | 28.5 | 0.0012 | 3.7 | 7.6 |
| pfu_aug1.0_8199.1_67820.t1 | 10 | 10 | zf-C2H2_4 | 429 | 439 | 1.3e-06 | 28.2 | 0.026 | 78.0 | 3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8199.1_67820.t1 | gi|338726929|ref|XP_001496009.3| | 3.0e-22 |
Transcript
| Transcript ID | pfu_aug1.0_8199.1_67820.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8199.1_67820.t1 cattcttcgtgatagtacatgtatattttcactttcagaaacatcacgtgaggaaggactatgacgaggaggaagaggag agagaagtgattatcacatgtcagtcatgtgatcagacatttgacagttatagagcattcagtgaacataatgataaggt acacaacacctgtaagacaagtagcactcctaaacccaaatcaaagccgtcagtaaaggtaaagaccgagaatatggaag acacagatagtctggctatggttgatgatgagcagaatgacccagatttcactgttaatgatcacgaaaatgatccagat tccaatcccgatgcggaaaacttccacgctaccgtagacaataaatcaaagaataagaggtcatcaaaccaacaaaagta ttactcagaggaggatttcaaagcctgctctgttaagctaaaggactttggagatagagtagatttggagaaaatgaggt gtaagatttgctatagaatgtttaaaagtcctgtgcgtttattccaacatatggaaaatcatgatagccctgcacacgaa tgtagtgtatgtggaaaaaagtgtgcaacacccttcagactaaaagagcatatgaggaagcattcacaggggctgccatg caagttctgtaacggtacttatatgcaccaacggaatcttaaccggcactatgtcaaagtgcacaagatgaaacactgca aacagtgcaaagaaatatttccgctttcaaaaatggctgagcactttgcatcttgcagaccaaaagagggcatgataaga tgcagaatatgttggcagatcttcaaggataagaatactcatcaggcacacatggaaagacatcgacaaagatcggaaaa aaccaatataaaaagagcaattattatctgtaagatttgtaaatccaagtttgaatctaaagagatgctgattaatcatg tgatcacctcccaccctgatcgtatggagtcctaccccatgcaaacaggacgttccagtgacggtattctgaaatgcaag tcctgctacaaagaattttattcaaaagaatcttttgctttacaccaggccagtcatatagaaaaggtacacaaatgtga aacttgccgagccagattctcaagcacatattccctgaagttacattccaagatacacctaaaacctggccaggctgtcc tccatgagtgtaaagtgtgccacaagacattcctacgacccaattccttatccattcacatgtttgcacatcggtctacc aaagatttctcctgcagtgaatgtgggaagtcattcagtttactcaaaacatcccacaataagaatgtaacaactataaa catccaaggaacatcaggaaatgtccaggtacaaaagacacctcagaggttaactggaaatcctggaaaacaacaagtag tatctcagagcctgctaggggcatctcagactcccatagtggcatctcaaagccttcaagggtcatctcacagccagcaa ttgacatctcaaactcaaagccaacaattgacatctcacagccttcttggagcatctcagattcctggaacaggacaagg ggaaggtccccttattattgcagagggcttacaggaggttgagaactacgtcattgaggactcggcagttatagccgagg ctcagcaagctgtggaggtgcttggttctatgaatgacgataacatggaatatgtccttataacaattcctaatgattca ctcacagtaagggaggatggaacatacctattaaacgacaccatccttggtgacgtactaaagtaa |
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Protein
| Protein ID | pfu_aug1.0_8199.1_67820.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8199.1_67820.t1 FFVIVHVYFHFQKHHVRKDYDEEEEEREVIITCQSCDQTFDSYRAFSEHNDKVHNTCKTSSTPKPKSKPSVKVKTENMED TDSLAMVDDEQNDPDFTVNDHENDPDSNPDAENFHATVDNKSKNKRSSNQQKYYSEEDFKACSVKLKDFGDRVDLEKMRC KICYRMFKSPVRLFQHMENHDSPAHECSVCGKKCATPFRLKEHMRKHSQGLPCKFCNGTYMHQRNLNRHYVKVHKMKHCK QCKEIFPLSKMAEHFASCRPKEGMIRCRICWQIFKDKNTHQAHMERHRQRSEKTNIKRAIIICKICKSKFESKEMLINHV ITSHPDRMESYPMQTGRSSDGILKCKSCYKEFYSKESFALHQASHIEKVHKCETCRARFSSTYSLKLHSKIHLKPGQAVL HECKVCHKTFLRPNSLSIHMFAHRSTKDFSCSECGKSFSLLKTSHNKNVTTINIQGTSGNVQVQKTPQRLTGNPGKQQVV SQSLLGASQTPIVASQSLQGSSHSQQLTSQTQSQQLTSHSLLGASQIPGTGQGEGPLIIAEGLQEVENYVIEDSAVIAEA QQAVEVLGSMNDDNMEYVLITIPNDSLTVREDGTYLLNDTILGDVLK |
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