Gene
| Gene Model ID | pfu_aug1.0_8199.1_67822 |
|---|---|
| Locus | scaffold8199.1 : 23676 ... 31505 : + |
| To GenomeBrowser | scaffold8199.1:23676..31505 |
| Genes list of scaffold | scaffold8199.1 |
| Synonym | pfu_aug2.0_308.1_27207 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8199.1_67822.t1 | 5 | 1 | LRR_6 | 19 | 28 | 4.7e-08 | 32.3 | 0.19 | 250.0 | 2.2 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 1 | LRR_1 | 19 | 28 | 4.5e-06 | 25.9 | 0.12 | 160.0 | 3.0 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 1 | LRR_4 | 20 | 33 | 1.2e-18 | 66.2 | 0.13 | 180.0 | 1.9 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 1 | LRR_8 | 20 | 74 | 1.1e-17 | 63.5 | 4.2e-05 | 0.057 | 13.1 |
| pfu_aug1.0_8199.1_67822.t1 | 1 | 1 | LRR_9 | 20 | 154 | 3.0e-12 | 46.4 | 2.9e-15 | 3.8e-12 | 46.0 |
| pfu_aug1.0_8199.1_67822.t1 | 6 | 1 | LRR_7 | 20 | 28 | 3.0e-07 | 29.5 | 0.078 | 100.0 | 3.7 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 2 | LRR_4 | 42 | 81 | 1.2e-18 | 66.2 | 2.7e-09 | 3.6e-06 | 26.4 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 2 | LRR_8 | 42 | 97 | 1.1e-17 | 63.5 | 7.7e-11 | 1.0e-07 | 31.5 |
| pfu_aug1.0_8199.1_67822.t1 | 6 | 2 | LRR_7 | 42 | 55 | 3.0e-07 | 29.5 | 0.62 | 830.0 | 1.0 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 2 | LRR_6 | 61 | 75 | 4.7e-08 | 32.3 | 0.003 | 4.0 | 7.7 |
| pfu_aug1.0_8199.1_67822.t1 | 6 | 3 | LRR_7 | 62 | 78 | 3.0e-07 | 29.5 | 0.0025 | 3.4 | 8.2 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 2 | LRR_1 | 63 | 82 | 4.5e-06 | 25.9 | 0.012 | 16.0 | 6.0 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 3 | LRR_4 | 76 | 104 | 1.2e-18 | 66.2 | 2.3e-09 | 3.2e-06 | 26.6 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 3 | LRR_8 | 81 | 120 | 1.1e-17 | 63.5 | 5.0e-09 | 6.7e-06 | 25.7 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 3 | LRR_6 | 84 | 102 | 4.7e-08 | 32.3 | 2.8e-07 | 0.00037 | 20.2 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 4 | LRR_4 | 85 | 124 | 1.2e-18 | 66.2 | 7.1e-13 | 9.5e-10 | 37.8 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 4 | LRR_8 | 85 | 143 | 1.1e-17 | 63.5 | 9.3e-11 | 1.2e-07 | 31.3 |
| pfu_aug1.0_8199.1_67822.t1 | 6 | 4 | LRR_7 | 85 | 100 | 3.0e-07 | 29.5 | 0.00015 | 0.2 | 11.9 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 3 | LRR_1 | 86 | 103 | 4.5e-06 | 25.9 | 2.5e-05 | 0.034 | 14.1 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 4 | LRR_6 | 110 | 124 | 4.7e-08 | 32.3 | 0.00023 | 0.3 | 11.2 |
| pfu_aug1.0_8199.1_67822.t1 | 6 | 5 | LRR_7 | 110 | 123 | 3.0e-07 | 29.5 | 0.0011 | 1.5 | 9.3 |
| pfu_aug1.0_8199.1_67822.t1 | 4 | 4 | LRR_1 | 111 | 140 | 4.5e-06 | 25.9 | 0.00065 | 0.87 | 9.8 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 5 | LRR_4 | 136 | 143 | 1.2e-18 | 66.2 | 0.16 | 210.0 | 1.6 |
| pfu_aug1.0_8199.1_67822.t1 | 5 | 5 | LRR_6 | 136 | 143 | 4.7e-08 | 32.3 | 0.51 | 690.0 | 0.9 |
| pfu_aug1.0_8199.1_67822.t1 | 6 | 6 | LRR_7 | 137 | 143 | 3.0e-07 | 29.5 | 0.73 | 980.0 | 0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8199.1_67822.t1 | gi|345485564|ref|XP_001606921.2| | PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X2 [Nasonia vitripennis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| egg-Dshape | 3 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8199.1_67822.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8199.1_67822.t1 atggatatggaaaagaggttagaacttgagagaagagggaaaaaagcggatgagataaaagaactaaacttggacaactg cagggcatgttccattgaggggttaacagatgaatactcagacttggagacacttagccttattaatgttggtttaacag cactgaaaaattttccaaatctgcctaaactgaagaagcttgaactcagtgacaataaaattctgtctggactcaataat ctacaaggatgtccaaatctgactcatttaagcctaagtggaaataagattaaagacatagatgctctagaaccactaaa atcattttcaaatttgaaaagtttagacctatataattgtgatgtaacaaattcagatgaatatagagagaaagtgtttg agatgttaccaaatttgaaatacctggatggctttgatcagaatgatggtgaggcggatgaagaagaagacgatgacgat gacaattctggagaagatggtgatgaagatgaaaatgatgttgagaatgaagatgaggaaaattcatcaccagcaagagg cacaaaacggaaacatgaagatgaagagcagggtgatgactga |
|
Protein
| Protein ID | pfu_aug1.0_8199.1_67822.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8199.1_67822.t1 MDMEKRLELERRGKKADEIKELNLDNCRACSIEGLTDEYSDLETLSLINVGLTALKNFPNLPKLKKLELSDNKILSGLNN LQGCPNLTHLSLSGNKIKDIDALEPLKSFSNLKSLDLYNCDVTNSDEYREKVFEMLPNLKYLDGFDQNDGEADEEEDDDD DNSGEDGDEDENDVENEDEENSSPARGTKRKHEDEEQGDD |
|