Gene
| Gene Model ID | pfu_aug1.0_82.1_21958 |
|---|---|
| Locus | scaffold82.1 : 50376 ... 54650 : + |
| To GenomeBrowser | scaffold82.1:50376..54650 |
| Genes list of scaffold | scaffold82.1 |
| Synonym | pfu_aug2.0_1075.1_18071 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_82.1_21958.t1 | 2 | 1 | EF-hand_8 | 125 | 155 | 3.6e-07 | 29.6 | 9.3e-06 | 0.017 | 14.7 |
| pfu_aug1.0_82.1_21958.t1 | 1 | 1 | EF-hand_7 | 131 | 200 | 1.2e-12 | 47.7 | 1.2e-15 | 2.3e-12 | 46.8 |
| pfu_aug1.0_82.1_21958.t1 | 2 | 1 | EF-hand_1 | 131 | 157 | 6.9e-12 | 43.7 | 5.2e-07 | 0.00096 | 18.2 |
| pfu_aug1.0_82.1_21958.t1 | 2 | 1 | EF-hand_6 | 132 | 156 | 3.6e-09 | 35.7 | 1.4e-06 | 0.0026 | 17.5 |
| pfu_aug1.0_82.1_21958.t1 | 2 | 1 | EF-hand_5 | 135 | 153 | 2.1e-06 | 26.8 | 0.42 | 770.0 | -0.3 |
| pfu_aug1.0_82.1_21958.t1 | 2 | 2 | EF-hand_8 | 177 | 200 | 3.6e-07 | 29.6 | 1.5e-05 | 0.028 | 14.0 |
| pfu_aug1.0_82.1_21958.t1 | 2 | 2 | EF-hand_1 | 179 | 200 | 6.9e-12 | 43.7 | 2.1e-09 | 3.8e-06 | 25.8 |
| pfu_aug1.0_82.1_21958.t1 | 2 | 2 | EF-hand_6 | 180 | 200 | 3.6e-09 | 35.7 | 3.4e-06 | 0.0063 | 16.3 |
| pfu_aug1.0_82.1_21958.t1 | 2 | 2 | EF-hand_5 | 182 | 199 | 2.1e-06 | 26.8 | 1.1e-09 | 2.1e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_82.1_21958.t1 | gi|348533862|ref|XP_003454423.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP14-like [Oreochromis niloticus] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_82.1_21958.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_82.1_21958.t1 atgatctggaaaaacttctgtatcgtacttttgccgtctgctattttggcacaaagcttcgcggagacggaactgaaaat agaggtcactcgcaaagcagacgattgtgagagggttacggaggaaaaagatttactctatgttcattatactagcttct tcgagaatggaacaaagatcgaatcaagcttggagaatggaattagcaatctcttgctcagtaacgcttcgctacgctac acaagagacttccgctacgcttcacaagatgcgattcgctacgcttcacaagaggcacttcgatatgcttcacaagtgaa gcttgaaatccctcccgacacgactttagtttttgaggcagagctagtcctgtttaacgaccagagtgccgtgcatcaag cctttaccacactggataccgataacaacgatatgcttgacgaagatgagttaagagtcatgatgggtagctttcagtat ctgccgaaaaacatatttcctgaacaaccagatgatcagcgactggaggaaatgttctcggagatgttctcgcaagcgga cttgaacaaagacggcttcatttcaattgaagaatttctaattgtttctgcgctacaagacccgccaaatcaaacggaac cggaagcgaagaaagagaaaataccggaaaaggaattgtga |
|
Protein
| Protein ID | pfu_aug1.0_82.1_21958.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_82.1_21958.t1 MIWKNFCIVLLPSAILAQSFAETELKIEVTRKADDCERVTEEKDLLYVHYTSFFENGTKIESSLENGISNLLLSNASLRY TRDFRYASQDAIRYASQEALRYASQVKLEIPPDTTLVFEAELVLFNDQSAVHQAFTTLDTDNNDMLDEDELRVMMGSFQY LPKNIFPEQPDDQRLEEMFSEMFSQADLNKDGFISIEEFLIVSALQDPPNQTEPEAKKEKIPEKEL |
|