Gene
| Gene Model ID | pfu_aug1.0_82.1_21959 |
|---|---|
| Locus | scaffold82.1 : 58496 ... 63717 : + |
| To GenomeBrowser | scaffold82.1:58496..63717 |
| Genes list of scaffold | scaffold82.1 |
| Synonym | pfu_aug2.0_1075.1_18072 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_82.1_21959.t1 | 1 | 1 | FKBP_C | 1 | 42 | 2.5e-08 | 33.8 | 2.8e-11 | 5.8e-08 | 32.6 |
| pfu_aug1.0_82.1_21959.t1 | 1 | 1 | SPARC_Ca_bdg | 48 | 113 | 7.2e-06 | 26.0 | 8.6e-09 | 1.8e-05 | 24.7 |
| pfu_aug1.0_82.1_21959.t1 | 1 | 1 | EF-hand_7 | 50 | 113 | 2.8e-07 | 30.5 | 2.4e-10 | 5.0e-07 | 29.7 |
| pfu_aug1.0_82.1_21959.t1 | 2 | 1 | EF-hand_6 | 50 | 71 | 3.1e-06 | 26.5 | 3.3e-05 | 0.07 | 13.0 |
| pfu_aug1.0_82.1_21959.t1 | 2 | 1 | EF-hand_1 | 50 | 71 | 6.9e-06 | 24.9 | 0.0026 | 5.5 | 6.5 |
| pfu_aug1.0_82.1_21959.t1 | 2 | 2 | EF-hand_6 | 91 | 113 | 3.1e-06 | 26.5 | 0.0001 | 0.22 | 11.4 |
| pfu_aug1.0_82.1_21959.t1 | 2 | 2 | EF-hand_1 | 92 | 113 | 6.9e-06 | 24.9 | 2.0e-06 | 0.0042 | 16.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_82.1_21959.t1 | gi|74194604|dbj|BAE37329.1| | unnamed protein product [Mus musculus] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_82.1_21959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_82.1_21959.t1 atgtgcataggggagaaaaggaagattacggtaccatcacacctagcttacggaaaggagggatacaaagtgggcaattt tgtagtacctcctgacaccacactagttttcgaggcagagctcgtgttgtttcacgaagagcgcgccatacacgaagcct ttaccaagcttgacgccgataagaattatcttcttgacagagaagagatacgaattttacaggagagttttcagaagatc tcagaagagccacatgatcgtctggagaaaaggttcacggagatgttcactcaggcggacaaaaacgaagattccctcat ctcattagaggaatttttaattgtttctcagcttcaagatccgccaaaatcaacaggcgttgcgcgggataaagcggagc tagaaattggagaagtaagcgagcaagctgggccaaagcaggataaagaggaaccggaaattgcaaaagaatttggacag gttggatcaatgcaggataaagcggaaccggaaattgcaaaagaattcgggcaggttggatcaatgcaggataaagcgga accagaaacggagaaagaaagcgaggaggatagaacggaaaggaatattccggagaaggaagaattataa |
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Protein
| Protein ID | pfu_aug1.0_82.1_21959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_82.1_21959.t1 MCIGEKRKITVPSHLAYGKEGYKVGNFVVPPDTTLVFEAELVLFHEERAIHEAFTKLDADKNYLLDREEIRILQESFQKI SEEPHDRLEKRFTEMFTQADKNEDSLISLEEFLIVSQLQDPPKSTGVARDKAELEIGEVSEQAGPKQDKEEPEIAKEFGQ VGSMQDKAEPEIAKEFGQVGSMQDKAEPETEKESEEDRTERNIPEKEEL |
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