Gene
| Gene Model ID | pfu_aug1.0_8205.1_53128 |
|---|---|
| Locus | scaffold8205.1 : 49289 ... 55895 : - |
| To GenomeBrowser | scaffold8205.1:49289..55895 |
| Genes list of scaffold | scaffold8205.1 |
| Synonym | pfu_aug2.0_361.1_04060 |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | calponin |
| Description | Calponin partial sequence. BLASTP top hit to AB052656 (Mytilus galloprovincialis). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8205.1_53128.t1 | 1 | 1 | CH | 10 | 71 | 1.2e-06 | 28.5 | 9.5e-11 | 1.4e-06 | 28.2 |
Transcript
| Transcript ID | pfu_aug1.0_8205.1_53128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8205.1_53128.t1 atgggcgctaaatatgaccctgctgctgaggcggaagtcaggaactggataaaacagctgatcggcgaggacatcggtga cggcgccatgaacgtggagaaaaacctcagagatggagtcattcttatcaaacttttacaaaaactatacgaagggacct ccaacctacccaacaaggccagaaccatgaaactctcatacaacacaatgaatgctcctttcaaacagggctaa |
|
Protein
| Protein ID | pfu_aug1.0_8205.1_53128.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8205.1_53128.t1 MGAKYDPAAEAEVRNWIKQLIGEDIGDGAMNVEKNLRDGVILIKLLQKLYEGTSNLPNKARTMKLSYNTMNAPFKQG |
|