Gene
Gene Model ID | pfu_aug1.0_8218.1_45827 |
---|---|
Locus | scaffold8218.1 : 8751 ... 19136 : - |
To GenomeBrowser | scaffold8218.1:8751..19136 |
Genes list of scaffold | scaffold8218.1 |
Synonym | pfu_aug2.0_162.1_07076 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8218.1_45827.t1 | 1 | 1 | MFS_1 | 66 | 300 | 3.0e-13 | 49.2 | 8.1e-17 | 1.2e-12 | 47.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_8218.1_45827.t1 | gi|260819978|ref|XP_002605312.1| | hypothetical protein BRAFLDRAFT_89046 [Branchiostoma floridae] | 3.0e-20 |
Transcript
Transcript ID | pfu_aug1.0_8218.1_45827.t1 |
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Definition | - |
>pfu_aug1.0_8218.1_45827.t1 gtcacgtgcaaattccatcaatcatgaagcgattctcggaaaatttgcacatgtccaaccagaactataaacccatgaac accaaaacttacttcttcagttgctttattatggtgggaacagccaagtcttttggagtgatcatgttagcaatcaaaga gaaattcaacactgatactgcaacagcttctttaggcatgagtattggtggaatattctatactttcatcgggattagca atgcatgcctgtttggtaacggacttgtgatgattggtcactatttcctgaagtatcggtcagtggccacaggcttggcc ttatctggctccagtattggtacttttgcgcttccgcccatactccaactttgcctggacacgtatggactaaatggaac tctgttgctgattggtgggctgtatcttaacgtttgtgtctgtggggcattgtatagaccattttatttttatgaaaaaa agaaaaatgtggaaaatgcgattgaaaaatctgaggctgataaattgaatcattacgacaaggctgaagaaggggatggt cttcttgcaattgaaggcaatggaatgagaaaagatcgtttcacgagtacagggagcataatgatgggctcgatggaaag tctacatgctgaggcttatcttcaagagaagagggagcaagttaaaacagaaaataagtcaagggatttttttaggtttt tcattgagaagattttcccttttgtagttctcaaaataccggttgttatctattttacagttttaagctttttcatattt tttggttatttcaactttgtagtattcatgccagccgatttaaagacacggggcattactggttatgaaaaagcttggtt ggtgtctatatcaggtattggggatctgatcggtagggaagaggatgaaccctattga |
Protein
Protein ID | pfu_aug1.0_8218.1_45827.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8218.1_45827.t1 HVQIPSIMKRFSENLHMSNQNYKPMNTKTYFFSCFIMVGTAKSFGVIMLAIKEKFNTDTATASLGMSIGGIFYTFIGISN ACLFGNGLVMIGHYFLKYRSVATGLALSGSSIGTFALPPILQLCLDTYGLNGTLLLIGGLYLNVCVCGALYRPFYFYEKK KNVENAIEKSEADKLNHYDKAEEGDGLLAIEGNGMRKDRFTSTGSIMMGSMESLHAEAYLQEKREQVKTENKSRDFFRFF IEKIFPFVVLKIPVVIYFTVLSFFIFFGYFNFVVFMPADLKTRGITGYEKAWLVSISGIGDLIGREEDEPY |