Gene
| Gene Model ID | pfu_aug1.0_8238.1_17259 |
|---|---|
| Locus | scaffold8238.1 : 3006 ... 15073 : + |
| To GenomeBrowser | scaffold8238.1:3006..15073 |
| Genes list of scaffold | scaffold8238.1 |
| Synonym | pfu_aug2.0_1536.1_21677 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8238.1_17259.t1 | 1 | 1 | Lipocalin_2 | 27 | 120 | 7.4e-14 | 51.7 | 1.9e-17 | 1.4e-13 | 50.8 |
| pfu_aug1.0_8238.1_17259.t1 | 1 | 1 | Lipocalin | 30 | 148 | 2.6e-09 | 37.1 | 5.4e-13 | 4.0e-09 | 36.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8238.1_17259.t1 | gi|291241282|ref|XP_002740542.1| | PREDICTED: apolipoprotein D-like [Saccoglossus kowalevskii] | 8.0e-18 |
Transcript
| Transcript ID | pfu_aug1.0_8238.1_17259.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8238.1_17259.t1 atgagactcgaaccagcaaccttatggcccttaccactagaacacggcgccaactggttagagatattttacttttttca gaagtattccggtcaatggtttgagtacaaacgctacttcacaatcttccaacaaggaattgagtgttccagagccagat acaggcccacagacggtggaagaattcttgtaaggaacagtggattcaacaccaggactggaaggccaactgtcatcaaa ggttttgcctatgctccgaatccaggaagaccagggagattaattgtcgatttcccaagttcgccttcaccccctggtaa ctattgggttttagatacagactacaagactttctccattgtgtacagttgtcgggacactggtagaccttacagccccg ttaaatcagacatttttcaccgtgacgaacttcgcctttcgtacttcgaacttcgcacttcagttctgatagaaagttct ataagctggttgccagaagaacaggaagtccaatataccaattacattgagtatactaataaatatgtagatggctccgc ttatgagtttacacgtgaacggcagctacgccactga |
|
Protein
| Protein ID | pfu_aug1.0_8238.1_17259.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8238.1_17259.t1 MRLEPATLWPLPLEHGANWLEIFYFFQKYSGQWFEYKRYFTIFQQGIECSRARYRPTDGGRILVRNSGFNTRTGRPTVIK GFAYAPNPGRPGRLIVDFPSSPSPPGNYWVLDTDYKTFSIVYSCRDTGRPYSPVKSDIFHRDELRLSYFELRTSVLIESS ISWLPEEQEVQYTNYIEYTNKYVDGSAYEFTRERQLRH |
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