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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_826.1_29437
Locus scaffold826.1 : 80180 ... 92105 : -
To GenomeBrowser scaffold826.1:80180..92105
Genes list of scaffold scaffold826.1
Synonym pfu_aug2.0_1575.1_18417

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_826.1_29437.t1 1 1 G6PD_N 4 53 3.0e-23 82.9 6.5e-27 4.8e-23 82.3
pfu_aug1.0_826.1_29437.t1 1 1 G6PD_C 55 348 0.0 457.5 0.0 0.0 457.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_826.1_29437.t1 gi|113207852|emb|CAJ28912.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
Dshape 1
maleGonad 1
mantle 1
mantleEdge 1

Transcript
Transcript IDpfu_aug1.0_826.1_29437.t1
Definition-
>pfu_aug1.0_826.1_29437.t1
atggcaaagggggataactggacgaggatagttgtagagaagccgtttggtaaagacttggacagctcaaacaaactatc
tgaccatctagcagctttgtttaaggaggaagagttatataggatagatcattacctcgggaaggaaatggtccaaaacc
tcatggtactcaggtttgcaaacaagatcttcagtcctgtgtggaacagggatggtatagcttctgtggtgatcagcttt
aaggaaccttttggtacacaaggaaggggaggctactttgatgaatttgggattataagagatgtcatgcagaaccattt
gcttcaaattttaactttggttgccatggagaagccaccatcaactgccgctgaagatatacgcagtgaaaaggtaaagg
tgctcaagagtatatccccactaaccatggacaaagtagtgctgggtcagtatgtaggaaatcctgatggtgaaggggat
gagaagcaggggtacttagatgacccaactgttcctaaagggtctgtaactccaacttttgtgacagctgtgctgtatgt
gaaaaatgagagatgggatggagtcccctttattctgaggtgtggtaaagctttaaatgaaagaaaagctgaggtgagag
tccagtttaaggatgttgcaggcgatattttcccaactggagaagtacagagaaatgaacttgtaatcagagtgcagcca
gatgaggctgtgtaccttaaaatgatggctaaatctccgggcatgacgtttaaaagcgaagaaacagaactagatctctc
ttatggtcatagatataaggaggtcaaattacctgatgcttatgaaagactgatattagatgtattcctaggatctcaga
ttcattttgtcagatctgacgagctctcggaggcttggagaatcttcactcccttattacatcaaatagaacgggaaaaa
cccaaacctattccttacgtttatggaagtcgaggacctaaagagagtgatgaaatgagtgcaaaacatgacttcaaata
ctctggcacataccgctggaccaacataaaagcaccattgtga

Protein
Protein IDpfu_aug1.0_826.1_29437.t1
Definition-
>pfu_aug1.0_826.1_29437.t1
MAKGDNWTRIVVEKPFGKDLDSSNKLSDHLAALFKEEELYRIDHYLGKEMVQNLMVLRFANKIFSPVWNRDGIASVVISF
KEPFGTQGRGGYFDEFGIIRDVMQNHLLQILTLVAMEKPPSTAAEDIRSEKVKVLKSISPLTMDKVVLGQYVGNPDGEGD
EKQGYLDDPTVPKGSVTPTFVTAVLYVKNERWDGVPFILRCGKALNERKAEVRVQFKDVAGDIFPTGEVQRNELVIRVQP
DEAVYLKMMAKSPGMTFKSEETELDLSYGHRYKEVKLPDAYERLILDVFLGSQIHFVRSDELSEAWRIFTPLLHQIEREK
PKPIPYVYGSRGPKESDEMSAKHDFKYSGTYRWTNIKAPL

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