Gene
| Gene Model ID | pfu_aug1.0_8260.1_17269 |
|---|---|
| Locus | scaffold8260.1 : 1508 ... 14535 : - |
| To GenomeBrowser | scaffold8260.1:1508..14535 |
| Genes list of scaffold | scaffold8260.1 |
| Synonym | pfu_aug2.0_383.1_10716 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8260.1_17269.t1 | 2 | 1 | MFS_1 | 5 | 162 | 9.5e-14 | 50.8 | 9.9e-15 | 7.4e-11 | 41.3 |
| pfu_aug1.0_8260.1_17269.t1 | 2 | 2 | MFS_1 | 141 | 218 | 9.5e-14 | 50.8 | 3.9e-07 | 0.0029 | 16.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8260.1_17269.t1 | gi|212374792|dbj|BAG83236.1| | vesicular glutamate transporter [Lymnaea stagnalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8260.1_17269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8260.1_17269.t1 atgtcgtttgagaagccctctacccacccatacatcacacaggaggagaaaatctacatagaaacaagcattggggagac tggaatgtccagtactaagactagcagcacaccatggctgagcttcttcacctccatgccagtctatgccatcatagtgg ctaacttctgtcgtagctggactttctatttgctcatcatttcacaacctatgtacttcacagaggttttcaaattcaat gtttccaagagtggaatactatcggcactcccccatctagtgatggctataattgtacccattggtggtgctatagccga ctctttgcgcaagcgcactcttacaactaccgtagtcaggaagattttcaattgtggaggatttgggttagaggcgtgtt ttcttttgggcgtcgctctaacgagaaataccaccacagctatagtatgtctgacgatggccgttggcttcagtggattt gctatctcagccgatgagtggcaaactgttttcatcattgccagttgtgtgcattttgctggaataatattctatggatt attcgcttccggcgaaaaacaagtatgggcagacccaccggaagaggaaacatggcgaccggaagatactctcaaagagg agaaatcgggaaagctgttctcatatggcgcttttaccggttctatggactttactaaagacaaaaatcttagtcaaaat ggatctataaataaagaacaagtagctaacggtagcatcggaaatggacagattccgtacgggggttttgatagaagtga acagtatgggggttacgatgcaccagttcccaaacaattttcaattgatgctcctttatatcaaacaaaagaagaattag tccaagtagaatctaaggacaaatatttgcatgatgacagagatttatga |
|
Protein
| Protein ID | pfu_aug1.0_8260.1_17269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8260.1_17269.t1 MSFEKPSTHPYITQEEKIYIETSIGETGMSSTKTSSTPWLSFFTSMPVYAIIVANFCRSWTFYLLIISQPMYFTEVFKFN VSKSGILSALPHLVMAIIVPIGGAIADSLRKRTLTTTVVRKIFNCGGFGLEACFLLGVALTRNTTTAIVCLTMAVGFSGF AISADEWQTVFIIASCVHFAGIIFYGLFASGEKQVWADPPEEETWRPEDTLKEEKSGKLFSYGAFTGSMDFTKDKNLSQN GSINKEQVANGSIGNGQIPYGGFDRSEQYGGYDAPVPKQFSIDAPLYQTKEELVQVESKDKYLHDDRDL |
|