Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8266.1_17272
Locus scaffold8266.1 : 11493 ... 43372 : -
To GenomeBrowser scaffold8266.1:11493..43372
Genes list of scaffold scaffold8266.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_8266.1_17272.t1 1 1 Glyco_hydro_38C 8 90 3.5e-10 39.2 5.8e-14 4.3e-10 38.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_8266.1_17272.t1 gi|156383616|ref|XP_001632929.1| predicted protein [Nematostella vectensis] 3.0e-15

Transcript
Transcript IDpfu_aug1.0_8266.1_17272.t1
Definition-
>pfu_aug1.0_8266.1_17272.t1
gtctgttaggaaagggcttagttatagaaaacatcgcagacatcaggcgtcataataacacagagctgatcctgaggctc
gagacagacgttatagactggaatcatgggatatgtacagatcttaacggatttcagatgcacagaagaaagaagcaaga
caaactgaaaatacagggaaagttgttacccatgacaacaatggcattgttagagagtaagacatacagactgagtgtgt
tgacaacaagttcacgtggtgttgctagtcagtcccctgtactgtgtgtttatcgtaacttccctgttctgacattcatg
attatgcatatggaactctataattccacagttatggccattccaatatggatgtag

Protein
Protein IDpfu_aug1.0_8266.1_17272.t1
Definition-
>pfu_aug1.0_8266.1_17272.t1
LLGKGLVIENIADIRRHNNTELILRLETDVIDWNHGICTDLNGFQMHRRKKQDKLKIQGKLLPMTTMALLESKTYRLSVL
TTSSRGVASQSPVLCVYRNFPVLTFMIMHMELYNSTVMAIPIWM

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495