Gene
| Gene Model ID | pfu_aug1.0_8273.1_67834 |
|---|---|
| Locus | scaffold8273.1 : 16203 ... 27995 : - |
| To GenomeBrowser | scaffold8273.1:16203..27995 |
| Genes list of scaffold | scaffold8273.1 |
| Synonym | pfu_aug2.0_509.1_30843 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8273.1_67834.t1 | 1 | 1 | C1q | 47 | 174 | 2.1e-23 | 82.6 | 1.7e-27 | 2.6e-23 | 82.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8273.1_67834.t1 | gi|325504441|emb|CBX41720.1| | putative C1q domain containing protein MgC1q71 [Mytilus galloprovincialis] | 4.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8273.1_67834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8273.1_67834.t1 atgatcatcattgtgttggctgttcttggatccatccatgtcgaatcatgtgaggatgagaaaaagggaacccttggttt gctgtcacagtgtattgatagacttggaggaaagcatgaagatcaacgaagaattgttgccttcgcagcaggaccatcaa atcctatcaaagatgtgttacatcaggctaccatcatcttcaataaggcaagcataaacacggatggtgtttatgatcca aagtcgggaaagtttaccgctcccatggccggactttataagtttgattggacaatcctggtagagaatggaaaatactg tgtcacatttttgatccacgaatcgaatgtacaaactgtagttggcagcaaccatccgggggacaaggacgactggagca caggtactcaaacaactatcttagaattaaaatcaggagataaggtctggatacgagcaagaggagctaattgtaaatat attgcgcaatttccatattccaccttcaatggatatatgctgtag |
|
Protein
| Protein ID | pfu_aug1.0_8273.1_67834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8273.1_67834.t1 MIIIVLAVLGSIHVESCEDEKKGTLGLLSQCIDRLGGKHEDQRRIVAFAAGPSNPIKDVLHQATIIFNKASINTDGVYDP KSGKFTAPMAGLYKFDWTILVENGKYCVTFLIHESNVQTVVGSNHPGDKDDWSTGTQTTILELKSGDKVWIRARGANCKY IAQFPYSTFNGYML |
|