Gene
| Gene Model ID | pfu_aug1.0_82763.1_63880 |
|---|---|
| Locus | scaffold82763.1 : 1 ... 2991 : + |
| To GenomeBrowser | scaffold82763.1:1..2991 |
| Genes list of scaffold | scaffold82763.1 |
| Synonym | pfu_aug2.0_21.1_03428 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_82763.1_63880.t1 | 7 | 1 | PKD | 1 | 20 | 1.7e-12 | 46.8 | 0.00082 | 4.0 | 7.2 |
| pfu_aug1.0_82763.1_63880.t1 | 7 | 2 | PKD | 43 | 100 | 1.7e-12 | 46.8 | 3.6e-13 | 1.8e-09 | 37.2 |
| pfu_aug1.0_82763.1_63880.t1 | 7 | 3 | PKD | 138 | 187 | 1.7e-12 | 46.8 | 1.2e-06 | 0.0062 | 16.2 |
| pfu_aug1.0_82763.1_63880.t1 | 2 | 1 | REJ | 152 | 194 | 0.0 | 221.7 | 0.0068 | 34.0 | 2.5 |
| pfu_aug1.0_82763.1_63880.t1 | 2 | 2 | REJ | 229 | 649 | 0.0 | 221.7 | 0.0 | 0.0 | 221.7 |
| pfu_aug1.0_82763.1_63880.t1 | 7 | 4 | PKD | 231 | 260 | 1.7e-12 | 46.8 | 0.087 | 430.0 | 0.7 |
| pfu_aug1.0_82763.1_63880.t1 | 7 | 5 | PKD | 365 | 392 | 1.7e-12 | 46.8 | 0.0051 | 25.0 | 4.6 |
| pfu_aug1.0_82763.1_63880.t1 | 7 | 6 | PKD | 429 | 463 | 1.7e-12 | 46.8 | 0.053 | 260.0 | 1.4 |
| pfu_aug1.0_82763.1_63880.t1 | 7 | 7 | PKD | 628 | 653 | 1.7e-12 | 46.8 | 0.66 | 3200.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_82763.1_63880.t1 | gi|790819|gb|AAB59488.1| | polycystic kidney disease-associated protein [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_82763.1_63880.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_82763.1_63880.t1 tcaacactcctggaacatatacagtacaagctattgtcaataataatatcagtaactatacagctagtacctctgttctg gctcaagatgccatacaaggactcaatattacaggatgtgacatcacagctgtagaggataccaatgtaccgtttacagg gtctgtaacaagaggtactgacgtcacgtatgtatggactgcaagtaatggtttctctggtactggaagctctgttacag ctgtctttgcggataccggtgattttcaagtaattgtgaacgccagtaatgtagtggatacagcagagctgaggtgccaa atggaaataattggtatcattgccaacattcagatcatcaaccaggcttcatcaatatattttactacataccaagttag cttcttggttgctgggcataacttggtaggtgtgacctacacatggactttcacaggaccaactactattgttcgaacaa ccaccactaacctgcatgctgaaacatttaccgtggctggaaactacactcttacactgaatgtatccaatctgatcagc agtgagatagcaactacagagtttaccatcagagagcttacatgcgctgcacactctatgacaactggtggacttacgtc aaaaacaattttccgttcagatccctctgtatttgagattgttgtggacaccaatagctgtgacagctacaagctagctt atacatggacagtgtatcaagatgtatgcagtgctggaggtacaacatcagtgtcgttatcaagctccgtatttacaacc tcctccaagtttataatccccgggcagactttgacgtatggtaactactgtgtgaaggcagagtcagagtttatagacac gccccttaaggagaaggtggagtttgacctcaccatcatcccatcagatcctgtagcgttactggcgggtggatctcgta tcattgagtacgtgtccagggatatggagttagacggcagccagtcgtttgatcctgacaacagtggcagcctacagtat tcatgggcctgttctgtcagcccgtcaagaagtggtagtggttgtgatgccataacagggaatacatcaaacaaggtgac catgacatcgtccagtctgtctgtaggagagacctatacagtccaactgactgtctccattacatcaaggccatccagta ctgtatctaaagagatcctgatctcttctgatgatgtaccacaagtctccatagaatgtgtgtcatgtcaagctaacact aactatgtactaagccagggagtattagtaatgttacggggattctgctctaactgtggtaccgccacgttgacatacag atggacagcaaagtatggtagtacatccttaacactggattccaccaccagctcgactctagatgacaaaatcaacctgg ttttagacgaggatcagctgccagatgcaacaacatacagcttcaagctggtggtggagaaaaccgacacaagcggtaca gtgacagggtactcagaaatcgatatgacaggaaatacaccgccctctggtggatcatgcagtttgagccctatgacagc gaagtcactggaggacaaagtaacgtttacctgtactggttactctgactctagctctagtaatatcctgtactacaggg tggtctcgtacagtcaggacaccggctctatgggacagttcgttgtcctgtattacggcagtatgtctacgggagatttc tatgttgcaccttggccagcatctacaggcagtacgaggtccagtgtcaaaatcaagatctttgttgaggacatcagtgg aggggtgttacaagcttttgaccaggatgtgaccattacatcaccaacatttaccggcactaaagcagagtatatatggg aaagagcacagaccaccttagcaaacctggtccttgagaacaaccccaccctgatcctccagtattctatagcccttgcc catgaaatcaacgaggagtctaagctatcgggaggatccttcacggagatggatattcgtactaaagtcagaacggctgt tgtcttggctaccaatggactgcccttggagacacttcatgaaaaggaacaaatggctttcattcttgaacatatcacag taagacaaaactatttcttctaa |
|
Protein
| Protein ID | pfu_aug1.0_82763.1_63880.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_82763.1_63880.t1 NTPGTYTVQAIVNNNISNYTASTSVLAQDAIQGLNITGCDITAVEDTNVPFTGSVTRGTDVTYVWTASNGFSGTGSSVTA VFADTGDFQVIVNASNVVDTAELRCQMEIIGIIANIQIINQASSIYFTTYQVSFLVAGHNLVGVTYTWTFTGPTTIVRTT TTNLHAETFTVAGNYTLTLNVSNLISSEIATTEFTIRELTCAAHSMTTGGLTSKTIFRSDPSVFEIVVDTNSCDSYKLAY TWTVYQDVCSAGGTTSVSLSSSVFTTSSKFIIPGQTLTYGNYCVKAESEFIDTPLKEKVEFDLTIIPSDPVALLAGGSRI IEYVSRDMELDGSQSFDPDNSGSLQYSWACSVSPSRSGSGCDAITGNTSNKVTMTSSSLSVGETYTVQLTVSITSRPSST VSKEILISSDDVPQVSIECVSCQANTNYVLSQGVLVMLRGFCSNCGTATLTYRWTAKYGSTSLTLDSTTSSTLDDKINLV LDEDQLPDATTYSFKLVVEKTDTSGTVTGYSEIDMTGNTPPSGGSCSLSPMTAKSLEDKVTFTCTGYSDSSSSNILYYRV VSYSQDTGSMGQFVVLYYGSMSTGDFYVAPWPASTGSTRSSVKIKIFVEDISGGVLQAFDQDVTITSPTFTGTKAEYIWE RAQTTLANLVLENNPTLILQYSIALAHEINEESKLSGGSFTEMDIRTKVRTAVVLATNGLPLETLHEKEQMAFILEHITV RQNYFF |
|