Gene
| Gene Model ID | pfu_aug1.0_8279.1_38725 |
|---|---|
| Locus | scaffold8279.1 : 11816 ... 21459 : + |
| To GenomeBrowser | scaffold8279.1:11816..21459 |
| Genes list of scaffold | scaffold8279.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8279.1_38725.t1 | 3 | 1 | WD40 | 65 | 92 | 9.5e-07 | 28.4 | 0.0026 | 13.0 | 5.8 |
| pfu_aug1.0_8279.1_38725.t1 | 3 | 2 | WD40 | 107 | 132 | 9.5e-07 | 28.4 | 2.1e-05 | 0.11 | 12.4 |
| pfu_aug1.0_8279.1_38725.t1 | 3 | 3 | WD40 | 141 | 176 | 9.5e-07 | 28.4 | 0.0015 | 7.5 | 6.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8279.1_38725.t1 | gi|327264816|ref|XP_003217207.1| | PREDICTED: WD repeat-containing protein 16 [Anolis carolinensis] | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_8279.1_38725.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8279.1_38725.t1 atgagcaaaaccacgacgtcatttcgacgttatcgggaaaaatggcgtcacaaaccttcgcattcaaaatgtatgaaaaa cattattactaaacgtattgcattgacacttagcatgtatgaaatagaaaatccaatcttcatcacagtgtattctactc ataaaaggaaaagtacaatattgacaaatactgaagtcaacgctgtatgttatggtggagacaatgatagacaaatcata acgggaggaacaaacggaaagcttcagtactggaatattgaaaatggcactcttatccgagaagtacttgtatctggtgg tccaattaatgctattgacatgacttcaacgaagaaatatgttatcactggaggcgaagacaaagtattgaaagttcttg actacgcaggaggacacacattatttactgggatcggtcacagtgctcctattatgaaggtcagactttacgagaaggac agttccatcgtcagtgttgactcggaaggtgtcatcttaatctggaaattcccgcttttgtcttga |
|
Protein
| Protein ID | pfu_aug1.0_8279.1_38725.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8279.1_38725.t1 MSKTTTSFRRYREKWRHKPSHSKCMKNIITKRIALTLSMYEIENPIFITVYSTHKRKSTILTNTEVNAVCYGGDNDRQII TGGTNGKLQYWNIENGTLIREVLVSGGPINAIDMTSTKKYVITGGEDKVLKVLDYAGGHTLFTGIGHSAPIMKVRLYEKD SSIVSVDSEGVILIWKFPLLS |
|