Gene
| Gene Model ID | pfu_aug1.0_8280.1_02574 |
|---|---|
| Locus | scaffold8280.1 : 78 ... 2945 : - |
| To GenomeBrowser | scaffold8280.1:78..2945 |
| Genes list of scaffold | scaffold8280.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8280.1_02574.t1 | 1 | 1 | TFIID_20kDa | 52 | 115 | 1.6e-28 | 98.7 | 8.4e-32 | 2.1e-28 | 98.4 |
| pfu_aug1.0_8280.1_02574.t1 | 1 | 1 | CBFD_NFYB_HMF | 52 | 110 | 3.3e-06 | 27.0 | 1.7e-09 | 4.2e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8280.1_02574.t1 | gi|47212149|emb|CAF94342.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 7.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_8280.1_02574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8280.1_02574.t1 atgaacaagttaccaggacaagatgggatacctttggtgggtgtgtcgtccccctcactgggaattcagcagccacagcc cgtcaccctcaggcagtcagcaccctcgtctatcccaagcagcagtacccagggggagagtaaggtgctggacaaaaggc ggatccaggaacttgtcaaagaggtggatcctatggaacagctagatgaggaagtggaggaggctttgctgagcatagca gatgattttatagacagcgtagtgacagcagcttgtcagatagccaaacatagaaagtccaataccctggaggtcaagga cgtacagcttcatctagattacatgtatttcagattgaaattcatattggaggattga |
|
Protein
| Protein ID | pfu_aug1.0_8280.1_02574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8280.1_02574.t1 MNKLPGQDGIPLVGVSSPSLGIQQPQPVTLRQSAPSSIPSSSTQGESKVLDKRRIQELVKEVDPMEQLDEEVEEALLSIA DDFIDSVVTAACQIAKHRKSNTLEVKDVQLHLDYMYFRLKFILED |
|