Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_82824.1_27814
Locus scaffold82824.1 : 1 ... 10333 : -
To GenomeBrowser scaffold82824.1:1..10333
Genes list of scaffold scaffold82824.1
Synonym pfu_aug2.0_77.1_23381

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_82824.1_27814.t1 1 1 HECT 6 105 6.6e-22 78.0 5.2e-26 7.7e-22 77.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_82824.1_27814.t1 gi|322778902|gb|EFZ09318.1| hypothetical protein SINV_15066, partial [Solenopsis invicta] 8.0e-38

Transcript
Transcript IDpfu_aug1.0_82824.1_27814.t1
Definition-
>pfu_aug1.0_82824.1_27814.t1
tattttgagacagatgaccctgacctgtataagacaaaggtcagatatatccttgacaacagcattgacgacatggagct
gaccttttctgaggaggaatatactcctgacggccagttactcagggtagtggatctgatacccaatggtagtaagatac
cggtaacaaacgacaacaaagtacagtacattaacgccctggctcagtataaactagcgaacaacgtccgtgaggaagtg
gatacgttccttagaggcctcaacacgctcattcctgacaatctactcagtatatttgacgaaaatgaactcgag

Protein
Protein IDpfu_aug1.0_82824.1_27814.t1
Definition-
>pfu_aug1.0_82824.1_27814.t1
YFETDDPDLYKTKVRYILDNSIDDMELTFSEEEYTPDGQLLRVVDLIPNGSKIPVTNDNKVQYINALAQYKLANNVREEV
DTFLRGLNTLIPDNLLSIFDENELE

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