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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_82848.1_27816
Locus scaffold82848.1 : 1 ... 2970 : -
To GenomeBrowser scaffold82848.1:1..2970
Genes list of scaffold scaffold82848.1
Synonym pfu_aug2.0_1211.1_04886

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_82848.1_27816.t1 gi|291222209|ref|XP_002731112.1| PREDICTED: leucine-rich repeat-containing protein 45-like [Saccoglossus kowalevskii] 4.0e-30

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_82848.1_27816.t1
Definition-
>pfu_aug1.0_82848.1_27816.t1
atgcagcaagatcagatatttgaacttaaggagcagataactcatcttcaagcagaacagaaaattaaaggcactcattt
tgaagaacgaatacaacaagagaagaataagcatcgtgaggaaatgaaagaaggcgaacatatcagaaataaagaggttg
caagagttcgacaggaagcggaagagacagagaccgccctgagagagcgaattcagcggcttgaaatgacaagactagaa
ttggaggaagaagtcagtcggctgaaaaataccaacatcacggacaaaatgcatcatgaggaaagtctaacaatagccag
acagaaaatacagtctgatgaggaaaatcgacataaacagctggaggaaaaacttcgagtgaccttgacccttaaagatg
agttacagagtagatgtaaccagcaatcttctaccataaacgagcagcagtcacggctaagtagtcatgtcctagagctg
gaaaatatgaagaaaagggtagaggaggcaaatgag

Protein
Protein IDpfu_aug1.0_82848.1_27816.t1
Definition-
>pfu_aug1.0_82848.1_27816.t1
MQQDQIFELKEQITHLQAEQKIKGTHFEERIQQEKNKHREEMKEGEHIRNKEVARVRQEAEETETALRERIQRLEMTRLE
LEEEVSRLKNTNITDKMHHEESLTIARQKIQSDEENRHKQLEEKLRVTLTLKDELQSRCNQQSSTINEQQSRLSSHVLEL
ENMKKRVEEANE

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