Gene
| Gene Model ID | pfu_aug1.0_8293.1_09730 |
|---|---|
| Locus | scaffold8293.1 : 2566 ... 17638 : + |
| To GenomeBrowser | scaffold8293.1:2566..17638 |
| Genes list of scaffold | scaffold8293.1 |
| Synonym | pfu_aug2.0_3.1_10030 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8293.1_09730.t1 | 1 | 1 | Arf | 22 | 145 | 1.1e-06 | 28.0 | 1.2e-09 | 1.8e-06 | 27.3 |
| pfu_aug1.0_8293.1_09730.t1 | 1 | 1 | Ras | 24 | 188 | 1.8e-35 | 121.7 | 1.4e-38 | 2.1e-35 | 121.4 |
| pfu_aug1.0_8293.1_09730.t1 | 1 | 1 | Miro | 24 | 139 | 3.4e-14 | 53.3 | 4.1e-17 | 6.0e-14 | 52.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8293.1_09730.t1 | gi|125977532|ref|XP_001352799.1| | GA11338 [Drosophila pseudoobscura pseudoobscura] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8293.1_09730.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8293.1_09730.t1 atgtccgttatcagtgttcacctcatagatggtccgagatacaccatggcgacggggccaccaaattataagataattct atgtggggaatacggagtagggaaaagttccatcttccgtcgtttcatgaacgacacgttcaccacggagacggggaaga aatcaacgatgggcctggaccaaagctccagaacggttgatattggcgatttagaagtcaagttgacactttgggacacc ggcgggatggagaggatgagttttattggctccagttactaccggggtgcgcacgcagccttactgtgttacagcataca gaacaaagaaacatttaacgtgctatcacaatatatccttgacattgttatgaacgctgaaggcgccaaaatattcctct gtggcaacatggcggattgcgaagaccaagaaaacaaagtgacagaagccgacatggagaactttgaacgcgagtgtggg gacgtgctgtctgggatgtactctatttcgtgtaaagacaattctggcgtcaacgagatgttcaaagacatggcacgcgt gctacatcagcacgccattggacgcatgacgcttcggcgggaattaaatgtgataaaaccgggggaaaccccggaacaag acgctgaacaaaagaagaaatgctgtggatga |
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Protein
| Protein ID | pfu_aug1.0_8293.1_09730.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8293.1_09730.t1 MSVISVHLIDGPRYTMATGPPNYKIILCGEYGVGKSSIFRRFMNDTFTTETGKKSTMGLDQSSRTVDIGDLEVKLTLWDT GGMERMSFIGSSYYRGAHAALLCYSIQNKETFNVLSQYILDIVMNAEGAKIFLCGNMADCEDQENKVTEADMENFERECG DVLSGMYSISCKDNSGVNEMFKDMARVLHQHAIGRMTLRRELNVIKPGETPEQDAEQKKKCCG |
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