Gene
| Gene Model ID | pfu_aug1.0_8293.1_09731 |
|---|---|
| Locus | scaffold8293.1 : 17641 ... 45835 : - |
| To GenomeBrowser | scaffold8293.1:17641..45835 |
| Genes list of scaffold | scaffold8293.1 |
| Synonym | pfu_aug2.0_3.1_10031 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8293.1_09731.t1 | 2 | 1 | DLIC | 9 | 70 | 0.0 | 279.5 | 1.8e-27 | 2.1e-24 | 86.0 |
| pfu_aug1.0_8293.1_09731.t1 | 2 | 2 | DLIC | 71 | 212 | 0.0 | 279.5 | 0.0 | 0.0 | 193.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8293.1_09731.t1 | gi|119584835|gb|EAW64431.1| | dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8293.1_09731.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8293.1_09731.t1 atgggcagtctacgggagcgggcaaccatcttgggagaagtacagtccagttcagcaaccaatttaccatcaacaaaatc catattagttctaggtgataatgaaagtggaaaaaccacattagttgctaagcttcaaggtgtagaggagccgaagaaag ggtctggcttagagtattactatatagatgtcacagatgaatatagagatgtggttagattcttccaagaatacacagag cccgacgagagccatacagcgtcatccgcacattcacggcgtgacgtaaatcctttacatccctctgctagccatacaga aggagataaagttttactacctttaggagaaaatactttaacgcaaaatttagggattccaattatagtagttttaacaa agtgtgatgcaatctcaacattagaaaaagagcatgattataaagaagaacattttgacttcatacagcaacatgttaga aagttctgtttgcaatatggtgctgcattagtgtattcctctgttaaggaagagaaaaactgtgatttattatatagata tttagtacacagaatatttggtttccccttctcctcacaagcatatgttgttgaaagagacctcgtatttgtgagtccaa acctccggaagtga |
|
Protein
| Protein ID | pfu_aug1.0_8293.1_09731.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8293.1_09731.t1 MGSLRERATILGEVQSSSATNLPSTKSILVLGDNESGKTTLVAKLQGVEEPKKGSGLEYYYIDVTDEYRDVVRFFQEYTE PDESHTASSAHSRRDVNPLHPSASHTEGDKVLLPLGENTLTQNLGIPIIVVLTKCDAISTLEKEHDYKEEHFDFIQQHVR KFCLQYGAALVYSSVKEEKNCDLLYRYLVHRIFGFPFSSQAYVVERDLVFVSPNLRK |
|