Gene
| Gene Model ID | pfu_aug1.0_8296.1_53147 |
|---|---|
| Locus | scaffold8296.1 : 9584 ... 19047 : - |
| To GenomeBrowser | scaffold8296.1:9584..19047 |
| Genes list of scaffold | scaffold8296.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | Muscle M-line assembly protein |
| Description | Muscle M-line assembly protein partial sequence. BLASTP hit to GL888463 (Acromyrmex echinatior). This gene might be a partial region of titin or twitchin. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8296.1_53147.t1 | 1 | 1 | Pkinase | 101 | 353 | 2.1e-38 | 131.9 | 8.2004e-42 | 3.1e-38 | 131.4 |
| pfu_aug1.0_8296.1_53147.t1 | 1 | 1 | Pkinase_Tyr | 129 | 349 | 4.8e-24 | 84.8 | 1.9e-27 | 6.9e-24 | 84.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8296.1_53147.t1 | gi|328781653|ref|XP_392361.4| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8296.1_53147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8296.1_53147.t1 gaacagaagaatggctgattggtggttacaccgtggatcagatggcattggtcagtgggctgatggctgattccacatac cagttcagagtgtgtgcaactaataccataggaagtggtccatacagcgtatcatcactgccaacaaaaacacttaaaga tgattctgaggaaatagaactagagccattggagacgatactgttgtcaaagcagaatccacaggcgcatgaaacggtga catgtgattatgaaccgaaggaattgacactgaaagaggaaaatattgaaaacacttacaatttgtcagaaacattttac agaggtcagttctccgagttttcgctcgcaaaagaagcagtaaccaataagtacttcgtatcaaaacagataatccaatc agattcaaacaaggacaccattcagagagagttagaaattctacgtctcagccaatcaaatcaaaggattctgcggttgt tagactgtttcgtcttcaacagcaagatctactttatccacgaatacttctgcggtgttaatattgttgaacattttgca ttcaaaacaaaatattcggaggatatggttgccatagcaatacagcaggttctggatggagtacagtttttacaccagaa taacattgttcatttgaatctacaaccttcaagtatcgttatgcgtcgtcgctcttcactggatgtgaggattacagact ttactcttgcacaaacagtggactcaaaggaaggattagaggttccagtcaatggaaaccctgaattccttgcccctgaa gtgattgtgcaggagaaggtgtcctaccctgccgatatatggactgttggtgttctgaccttcttgttgctcagtggtga atcaccatactatggaagaaagaaagatgtgacgctgtccaacatcgcctataaccgttataaccccttggctttgtatg aaaatatcactagggatgctcttagattcatcttcaaagttctcaaacgtactccaagaaacaggatgaccgtcgatgca tgtttggaggaccgctggttacaaggcaaggattctatcgtaaaagctagacaggaagctatcttcaccactgttaaact aagaacctatatcgaacgtacactaactgatgcagatgaggatgctttgccgacactgaaagaactaagaaaggtgtttg aacttacagaggataaaagacacagatacagggttccggaaagaagttttgatgccgaagaacttgaaaagaaggaaaca aagattactttaaaaggtgatgaaggatcagtggacaaagacaaaccagaagttgcaactgaccaaccagaatcaaaaga aattattgatagaggtagtgagatgaaggactctactgaaactgatgacaaaacagacgacaaggatggtgacaaagatg acggtacatcacaaacttcaagtgacagaatcgaacaagtggctgatgacctggttgccacggcagtgaaggacgcattg cattctggggaaatctcaacaaagggtgttgaggatgcatag |
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Protein
| Protein ID | pfu_aug1.0_8296.1_53147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8296.1_53147.t1 TEEWLIGGYTVDQMALVSGLMADSTYQFRVCATNTIGSGPYSVSSLPTKTLKDDSEEIELEPLETILLSKQNPQAHETVT CDYEPKELTLKEENIENTYNLSETFYRGQFSEFSLAKEAVTNKYFVSKQIIQSDSNKDTIQRELEILRLSQSNQRILRLL DCFVFNSKIYFIHEYFCGVNIVEHFAFKTKYSEDMVAIAIQQVLDGVQFLHQNNIVHLNLQPSSIVMRRRSSLDVRITDF TLAQTVDSKEGLEVPVNGNPEFLAPEVIVQEKVSYPADIWTVGVLTFLLLSGESPYYGRKKDVTLSNIAYNRYNPLALYE NITRDALRFIFKVLKRTPRNRMTVDACLEDRWLQGKDSIVKARQEAIFTTVKLRTYIERTLTDADEDALPTLKELRKVFE LTEDKRHRYRVPERSFDAEELEKKETKITLKGDEGSVDKDKPEVATDQPESKEIIDRGSEMKDSTETDDKTDDKDGDKDD GTSQTSSDRIEQVADDLVATAVKDALHSGEISTKGVEDA |
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